| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1451 |
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| Symbol | hfq |
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| ID | 4897585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1511768 |
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| End bp | 1512001 |
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| Gene Length | 234 bp |
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| Protein Length | 77 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640112039 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_001043333 |
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| Protein GI | 126462219 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0310898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGCCG ATAAACAAAA CTTGCAGGAC GCCTTTCTGA ACCATGTCAG GAAGGCCAAG
GTTCCGGTTA CGATTTTTCT CATTAACGGT GTAAAACTGC AGGGCGTGAT TACCTGGTTC
GACAATTTCT GCGTCCTGCT GCGTCGGGAC GGACAGTCGC AGCTGGTCTA CAAGCACGCG
ATCTCGACCA TCATGCCCGG GCAACCGATC AATCTCTACG AGGGCGACGA CTGA
|
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| Protein sequence | MAADKQNLQD AFLNHVRKAK VPVTIFLING VKLQGVITWF DNFCVLLRRD GQSQLVYKHA
ISTIMPGQPI NLYEGDD
|
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