Gene Rsph17029_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1440 
Symbol 
ID4895872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand- 
Start bp1497459 
End bp1498100 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID640112028 
ProductTetR family transcriptional regulator 
Protein accessionYP_001043322 
Protein GI126462208 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0208928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACA GCTCTGCCCC CGTTCCGCGC GGCGACGAGA TCCTCGATCA GATCCGCGGC 
ACCTTCGCCG TGAAGGGGTT CGACGGCGCC TCGATGCAGG ATCTGGCCCG CGCCGCGGGC 
ATGAGCGTCG GCAACTTCTA CCGCTACTTT CCCTCGAAGG CCGCCATCGT CGAGGCGATC 
GTGCGGCGCG ATCTCGAAGG CGTCGAGCGC GACTTCGCCG CCGTGGTCTC GTCCGACGAT 
CCGATGGCGC GGCTGCGCGA GATCCTGCGC TACCGGATCG AAGTGGAGCT CTGCGAGGAG 
GATGCGCCGC TCTGGGCCGA GATCACCGCC ATGGCGCACC GCAACCCCGA GATCGCCGGC 
ATCTGCGAAC GCATGGAGAC GGAGATCCGC CGGGCCTTCC TCGGGATCTT CGCCCGCGTG 
ACGGGGCAAC CTCCGGCCGA GTCCGAGGCG CGCTTTGCAG CCCATGCCGC CTTCCTCGTG 
ATGCTGGTGC GGGCCTGGGC GCTCGACTGG CCGCAGAAGC GGGCCGGGGC GGTCGAACTG 
AAATCCCTTC TGCTGCGCAG CATCGACGCC ACCCTCGACG AGGTGGCACG GTGCGAGGCG 
CAGGGTGCTT CGAAAGCGAG AGGTCTGCCA TGCGGCGCGT GA
 
Protein sequence
MPDSSAPVPR GDEILDQIRG TFAVKGFDGA SMQDLARAAG MSVGNFYRYF PSKAAIVEAI 
VRRDLEGVER DFAAVVSSDD PMARLREILR YRIEVELCEE DAPLWAEITA MAHRNPEIAG 
ICERMETEIR RAFLGIFARV TGQPPAESEA RFAAHAAFLV MLVRAWALDW PQKRAGAVEL 
KSLLLRSIDA TLDEVARCEA QGASKARGLP CGA