Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1439 |
Symbol | |
ID | 4895537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1496299 |
End bp | 1497471 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640112027 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001043321 |
Protein GI | 126462207 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0228236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGCGCG TGATGACGAT TGCCCTTCTT GCCGGTCTGA TGCCCTGGGC GAGCCCCGCG CAGGAGGCCG CCACCCCGGC CGCAGGCGCT CAGGCCCTGC CCGCCATCAC GGTCTCGACC GTCGTACGCC GGCCGATGCG CGACCGGGTG ATCGCCTCGG GGCTGATCGG CGCGGTCGAG CTCGTGCAGG TCCAGCCGCT GATCGAGGGC CAGCCCATCG AGACGCTCGA GGCCGACGTG GGCGATACCG TGGCCGAGGG GCAGGTGCTG GCGCGCCTGT CGGTCTCGAC GCTCGAACTG CAGAAGAGCC AGTTCACCGC CTCGCTCGCC TCGGCGCGCG CCACCATTGC GCAGGCCGAG GCGCAGGTGC TCGAGGCCAA GGCCTCCGCC GACGAGGCCG AGCGGGTGAA CCGGCGCACC GCGCAGCTCC GCCAGCAGGG CGCGGCCTCG CAGGCGGCGG CCGATACGGC GCAGGCCGCG TCGGTCTCGG CCAATGCCCG CGTGATGGTT GCGCGCCAAA CGCTCGAGGC CGCGCGGGCG CAGGTGGCGC TGGCCGAGGC GCAGCTGGCC AATATCGAGC TGCAGCTGAA CCGCACGTCC GTGGTGGCGC CGGTGGCTGG CGAGATCGTC TCGCGCACGG CCAAGGTCGG CGCCATCGCC TCGGCGCAGG GCGAGCCCAT GTTCACACTG CTGCGCGACG GGCAGCTCGA GCTCTTTGCC GATGTGGCCG AGCAGGATCT GCTGCGGCTC AGGCCCGGGC AGACGGTGCT GATCCGCACG CTCGGCGCGG CAGAGCCGCT CGAAGGGACG GTCCGGCTGG TCGAGCCCAC CATCGACACG GCCACCCGCC TCGGCCGTGC GCGCATCGCC ATAGGCCACA GGGAGGCCGT GCGCTCGGGC ATGTTCGCCG AGGCCGAGAT TCTCGTGAGC GAGCGCGACG CACTGGCGGT GCCGGTGACG GCGGTCAGCG GCGGCGCCGA CGGCGCGACG GTCCTGCGCG TGCGTCAGGG CGGCGAGGTG GAGCGGACGC CCGTCACCAC GGGCATCCGC GACCGCGGCA TGGTCGAGAT CGTCGAGGGG CTGTTCTCGA ACGACCTCGT GGTGACGAAG GCCGGCGCCT TCGTGCGCCC CGGAGACCGG GTGAACCCGG TCCCCGCCGA ACCCGTCAAC TGA
|
Protein sequence | MRRVMTIALL AGLMPWASPA QEAATPAAGA QALPAITVST VVRRPMRDRV IASGLIGAVE LVQVQPLIEG QPIETLEADV GDTVAEGQVL ARLSVSTLEL QKSQFTASLA SARATIAQAE AQVLEAKASA DEAERVNRRT AQLRQQGAAS QAAADTAQAA SVSANARVMV ARQTLEAARA QVALAEAQLA NIELQLNRTS VVAPVAGEIV SRTAKVGAIA SAQGEPMFTL LRDGQLELFA DVAEQDLLRL RPGQTVLIRT LGAAEPLEGT VRLVEPTIDT ATRLGRARIA IGHREAVRSG MFAEAEILVS ERDALAVPVT AVSGGADGAT VLRVRQGGEV ERTPVTTGIR DRGMVEIVEG LFSNDLVVTK AGAFVRPGDR VNPVPAEPVN
|
| |