| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1438 |
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| Symbol | |
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| ID | 4898029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1493022 |
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| End bp | 1496288 |
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| Gene Length | 3267 bp |
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| Protein Length | 1088 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640112026 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001043320 |
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| Protein GI | 126462206 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.539754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0180094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCT CCGCCTGGTC GATCCGCAAT CCGGTCGCGC CGCTCCTCGG CTTCGTCCTG
CTGATGGTGC TGGGCTGGCA GGCCTTCAAC ACGCTGCCCA TCACGCGCTT CCCGAACATC
GACGTGCCGC TGGTGGCGGT GACGGTCGAT CAGGCCGGCG CCGCGCCCGC CGAGATGGAG
ACGCAGGTCA CCAAGGAGAT CGAGGATGCG GTGGCGGGCG TCACCGGGGT AAAGAATATC
ACCTCGACCG TGGTGGACGG CCGTTCGACC ACCGTCGTCG AGTTCCGCAT GGAGGTGCCC
ACCGAAAAGG CGGTGCAGGA CACGAAGGAC GCCATCGACC AGATCCGCGG CGACCTGCCG
GGCGGGATCG AGGCGCCCAT CGTGACGCGC ATCGATGTCG AGGGGCAGGC GATCATGACC
TTCGCCGTCT CCTCGCCGAA CATGACCATC GAGGAACTGT CCTGGTTCGT GGACGACACG
ATCACCCGCG CGCTTCAGGG CAAGCCCGGC ATCGGCCGGG TGGACCGCTA CGGCGGGGCC
GAGCGCGAGA TCCGGGTGGA GCTCGATCCG GTGAAGCTCG ACAGTTTCGG CATCACCGCG
CCGCAGGTGA ACACGCAGCT CCGCGCGACG AATGCCAATC TCGGCTCGGG CCGGGCCGAG
CTCGGGCAGG GCGAGCAGGC GATCCGCGTG CTGGGCGATG CGGCGACGGC CGGGCGGCTC
GCCGCCACGA CCATCGCGCT GCCCTCGGGG CGCTTCGTGC GGCTCTCGGA TCTGGGCGAG
GTGGTGGACA GCTACGAGGA GCTGCGCTCC TTCTCGCGCT TCAACGGCGA GCCGGTGGTG
ACCTTCGCGG TCTTCCGCGC CAAGGGCGCG AGCGAAGTGT CGGTGGCCGA GACCGTGAAT
GCGGTACTGG CCGATCTCGC GCGGGCGCAT CCCGAGGTCC GCGCCGAACT GGTGGACGAC
ACGGTCTTCT ACACCTACGG CAACTACGAG GCGGCGCTCC ACACGCTTCT CGAGGGGGCG
CTTCTGGCCA CGCTCGTGGT GCTGGCCTTC CTGCGCAACT GGCGCGCGAC CTTCATCGCG
GCGGTGGCGC TGCCGCTCTC GGCGGTGCCG ACCTTCTGGG TGATGGATCT CCTGGGCTTC
TCGCTCAACC TCGTGAGCTT CCTCGCCATC ACGCTCGCCA CCGGCATCCT CGTCGACGAT
GCCATCGTCG AGATCGAGAA CATCGCGCGC CACATCCGCA TGGGCAAGTC GCCCTACCGC
GCGGCCATCG ACGCGGCCGA CGAGATCGGC ATGGCGGTGA TCGCCACGTC GCTCACCATC
GTCGCGGTCT TCGTGCCGGT CTCGTTCATG CCCGGGATCC CGGGGCAATA TTTCGCCCAG
TTCGGCCTCA CCGTCGCCAT TTCGGTGCTC TTCTCGCTGC TCGTGGCGCG GCTCATCACG
CCGATGATGG CGGCCTATCT CATGCGCTCG AAGGATGCCG ACGAGAAGTC GCACGGCGAC
GGCTTCATCA TGCGCGGCTA TCTGGGCCTC GTGCGCCAGA CCCTGCGCTT TCGCTATCTC
ACGCTTCTGG GGGCCATCGG GGTCTTCGCT GTGTCCATGT TCTTCATGCT GCGCATTCCG
GGCAGCTTCA TCCCGCCCGA GGACGTGAGC CGCATCCCGC TCAGCGTGGA GCTCGCCCCC
GGCAGCTCGC TCGACGAGAC CGACCGGACG ACGCAGGCGA TCCTCGACCG GATCCGCGAC
GTGAAAGGGG TGGAGAATGT CTTCGTGCTG GGCGGCGCCT CGCCCACGGG CGAGCGCGAC
ATTCGCCGCG CGGCGGTGAC GGTGCTGCTC GAGAAACTCG ACCACCGGCT CAGCTACCGC
ATCGTGACAC TGGCCGGGCG GCTGCCGCTC GTGGGGCCGT TCGTGCCGCA GATGACGCCC
GAGGGCCGCG TCCGGCCGCA GAACGAGATC GAGGCCGAGA TCTTCGCGCG GATCGCCGAC
GTGCCGGACG CGCGCGCCTT CAAGCTGAAC GACCGGGGCG AGCGCGACCT GAGCTTCTCG
ATCCTCTCGA GCAGCGAGGC CGACCTGAAC ACCGCGGTGG CGCGGCTCGA ATCCGCGCTC
AGGGGCGATC CGCTGCTGGC CGATGTGGCC TCGGAGGGTG CGCTGCCACG ACCCGAGCTG
CAGATCACCC CGCGGGGCGA CGAGGCGGCC CGGCTTGGGG TGACCACGGC GCAGATCGCC
GAGATCGTGC GGGTGGCGAC CATCGGCGAC ATCGACGCGA GCCTCGCCAA GATCTCGCTC
GACGGGCGCC AGATCCCGGT GCGGGTGCAA CTCGCGACGG CGGCGCGGGG CGATCTGGCG
CGCATCGCGG CGCTGAAGGT CACCACCGCC TCGGGGGCGC AGGTGCCGCT CTCGGCCGTG
GCCGATATCC GCATCGCCGA AGGTCCGAGC GTCGTCGACC GGCTGAACCG CGAGCGGCGC
GCGACCATCG GGGCGAACCT GCCGGTGGGC GTGGCGCTCG GCACCGCCTC GGCGCGCTTC
AAGGAGATCA CCGAAAGCGT CGAGCTGCCG CCCACCGTCC GCATTCAGGA AGCGGGCGAC
GCCGAGGTGC AGCAGGAGCT GATGACGAGC TTCGGCAATG CGATGATCCT CGGGCTCATG
CTGGTGCTGA CCGTGCTGAT CCTGCTGTTC CGCTCGGTGC TTCAGCCCTT CACCATCCTC
TTCTCGCTGC CGCTGGCCAT CGGCGGCGTC GCCGCGGCGC TGATCCTGAC GGGCTCGGCG
CTCTCCATGC CGGTGCTGAT CGGGATCCTG ATGCTGATGG GGATCGTGAC CAAGAACGCG
ATCCTGCTCG TGGATTTCGC GGTCGAGATG CGGGCGCGGG GCATGGACCG GTTCTCGGCG
ATCCTCGAGG CCGGGCACAA GCGGGCCCGC CCCATCGTCA TGACCTCGAT CGCCATGTCG
GCGGGCATGC TGCCCTCGGC TCTCGGCGTG GGCGAGGGCG GGCCGTTCCG CGCGCCGATG
GCCACGGCCG TGATCGGCGG CATCATCGTC TCAACGGTGC TGAGCCTCGT GATCGTGCCG
TCCTTCTTCC TCATCATGGA CGATCTCTCG CGGCTCTTCG CACGGCTCTT CCGCGGCATT
GCGGGGGCGC GGGAAGAGGA GGTCCCGACA CCCACGCCCG AGGAGCTGGC CGAGCGCCTG
ACCGCGCGCG AGGCCGATCT GGCAGCACTT CAGGCCCGGG TGGCCGAGCT CGAACAGGCG
CCGAAGCGGA TGTTCGTGGC GCAATGA
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| Protein sequence | MNFSAWSIRN PVAPLLGFVL LMVLGWQAFN TLPITRFPNI DVPLVAVTVD QAGAAPAEME
TQVTKEIEDA VAGVTGVKNI TSTVVDGRST TVVEFRMEVP TEKAVQDTKD AIDQIRGDLP
GGIEAPIVTR IDVEGQAIMT FAVSSPNMTI EELSWFVDDT ITRALQGKPG IGRVDRYGGA
EREIRVELDP VKLDSFGITA PQVNTQLRAT NANLGSGRAE LGQGEQAIRV LGDAATAGRL
AATTIALPSG RFVRLSDLGE VVDSYEELRS FSRFNGEPVV TFAVFRAKGA SEVSVAETVN
AVLADLARAH PEVRAELVDD TVFYTYGNYE AALHTLLEGA LLATLVVLAF LRNWRATFIA
AVALPLSAVP TFWVMDLLGF SLNLVSFLAI TLATGILVDD AIVEIENIAR HIRMGKSPYR
AAIDAADEIG MAVIATSLTI VAVFVPVSFM PGIPGQYFAQ FGLTVAISVL FSLLVARLIT
PMMAAYLMRS KDADEKSHGD GFIMRGYLGL VRQTLRFRYL TLLGAIGVFA VSMFFMLRIP
GSFIPPEDVS RIPLSVELAP GSSLDETDRT TQAILDRIRD VKGVENVFVL GGASPTGERD
IRRAAVTVLL EKLDHRLSYR IVTLAGRLPL VGPFVPQMTP EGRVRPQNEI EAEIFARIAD
VPDARAFKLN DRGERDLSFS ILSSSEADLN TAVARLESAL RGDPLLADVA SEGALPRPEL
QITPRGDEAA RLGVTTAQIA EIVRVATIGD IDASLAKISL DGRQIPVRVQ LATAARGDLA
RIAALKVTTA SGAQVPLSAV ADIRIAEGPS VVDRLNRERR ATIGANLPVG VALGTASARF
KEITESVELP PTVRIQEAGD AEVQQELMTS FGNAMILGLM LVLTVLILLF RSVLQPFTIL
FSLPLAIGGV AAALILTGSA LSMPVLIGIL MLMGIVTKNA ILLVDFAVEM RARGMDRFSA
ILEAGHKRAR PIVMTSIAMS AGMLPSALGV GEGGPFRAPM ATAVIGGIIV STVLSLVIVP
SFFLIMDDLS RLFARLFRGI AGAREEEVPT PTPEELAERL TAREADLAAL QARVAELEQA
PKRMFVAQ
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