Gene Rsph17029_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1425 
Symbol 
ID4897650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1479431 
End bp1480393 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content68% 
IMG OID640112013 
Productlipoyl synthase 
Protein accessionYP_001043307 
Protein GI126462193 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0392901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAA AACTTGTGCG CGACCTGAAG ATTCCCGACC AGCGCCACCC GGAGAAGGCG 
CACCGGCCCG ACAACGTCCA GCCGAAGAAA CCGTCCTGGA TCCGGGTCAA GGCGCCGACG
TCCGAGGGCT ACAAGGAGAC GCGGGACATC ATCCGCGGCC AGAAGCTCGC CACCGTCTGC
GAGGAGGCGG GCTGCCCCAA CGTCGGCGAA TGCTGGAGCC AGGGCCACGC CACCATGATG
ATCATGGGCG AGATCTGCAC CCGCGGCTGC TCGTTCTGCA ACGTGGCGAC GGGCCGGCCG
CAGGCGCTCG ACGCGTTCGA GCCGGGCCGC GTCGCCCATG CGGTGAGCCA GCTGGGGCTG
AAGCATGTGG TGGTGACGAG CGTCGACCGC GACGATCTCG AGGATGGGGG CGCCGAGCAT
TTCGCCCAGA CCATCCGGGC GATCCGCCAT CGCGCGCCGG CCACCACCAT CGAGGTTCTG
GTGCCCGACT TCCTGAAATG CGGGCCTTCG GCGCTCGAGA CGGTGGTGGC GGCACGTCCC
GACGTCTTCA ACCACAATCT CGAGACGGTG CCCGGCCTCT ATCCCGAAGT GCGGCCCGGC
GCGCGCTACT TCCACTCGCT GCGGCTCCTG CAGCGCGCGA AGGAGCTCGA TCCCTCGATC
TTCACCAAGT CGGGGATCAT GGTGGGCCTA GGCGAGGACC GGCAGGGCGT GCTGCAGGTG
ATGGACGACA TGCGCTCGGC CGAGGTCGAT TTCCTGACCA TCGGCCAGTA TCTCCAGCCC
ACGCCCAAGC ATCACCGGGT CGACCGGTTC GTGACGCCCG AGGAATTCGC GGGCTACGAG
AAGGCGGCCT ACGGCAAGGG GTTCCTGATG GTCTCGGCGA CGCCGCTCAC GCGCTCCTCC
TACCATGCGG GCGACGATTT CGCCCGCCTG CGCGACGCCC GACAGAAGCG CCTCGGGGCC
TGA
 
Protein sequence
MIGKLVRDLK IPDQRHPEKA HRPDNVQPKK PSWIRVKAPT SEGYKETRDI IRGQKLATVC 
EEAGCPNVGE CWSQGHATMM IMGEICTRGC SFCNVATGRP QALDAFEPGR VAHAVSQLGL
KHVVVTSVDR DDLEDGGAEH FAQTIRAIRH RAPATTIEVL VPDFLKCGPS ALETVVAARP
DVFNHNLETV PGLYPEVRPG ARYFHSLRLL QRAKELDPSI FTKSGIMVGL GEDRQGVLQV
MDDMRSAEVD FLTIGQYLQP TPKHHRVDRF VTPEEFAGYE KAAYGKGFLM VSATPLTRSS
YHAGDDFARL RDARQKRLGA