Gene Rsph17029_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1375 
Symbol 
ID4897153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1429420 
End bp1431243 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content70% 
IMG OID640111962 
ProductABC transporter related 
Protein accessionYP_001043257 
Protein GI126462143 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0588139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG CACCCCTTCT CCAGCTTTCC GGCATTTCCC TCACCTTCGG CGGCGAGCCG 
ATCTTCGACG GGCTCGATCT CGTGGTCCAG CCGCAGGACA GGGTGGCCCT CGTCGGCCGC
AACGGCTCGG GCAAGTCCAC GCTCCTCAAG GTCATGGCGG GCCTCGTCGA GCCCGACCGG
GGCGAGCGCG TGGTGCCGGC GGGCACCTCC GTGGGCTACA TGGAGCAGGA TCCCGACCTG
TCGGCCTTCG CCACGCTCGG CGACTATGCC GCCTCGGGTC TCGCGCATGG CGAGGAATAC
CGGGTCGAGA TGGCGGCCGA GGGGCTGAAG TTCCGGCCCG AGACCCCGGT CGCCACCGCC
TCGGGCGGCG AGCGGCGCCG GGCGGCTCTG GCCAAACTCA TGGCCGAGGC GCCGGAGCTG
ATGCTGCTCG ACGAGCCCAC GAACCACCTC GACATTCAGG CGATCCAGTG GCTCGAGGCC
CAGTTGGCCG AGACCCGCAC GGCCTTCGTC CTCATCAGCC ACGACCGCGC CTTCCTGCGC
GCCCTCTCGC GCGCGACGCT CTGGATCGAC CGCGGACAGG TGCGCCGCCG CGAGGCGGGG
TTCGAGGGCT TCGAGGAGTG GCGCGAGCAG ATCTGGGCCG AGGAAGACGA TCAGCGCCAC
AAGCTCGACC GCAAGATCAA GGCCGAGGCC CGCTGGGCGG TCGAAGGGAT CTCGGCGCGC
CGGAAGCGCA ATCAGGGCAG GCTCCGGGCG CTGGCCGCGA TGCGTGAGGA ACGCCGGTCG
CAGATTCGCC GGCAGGGCAC GGCGGCGCTG GAATTCGAGG CGGGGACCAC CTCGGGCAAG
CGCGTGATCG AGGCGAAGGG GATCACGAAA GCTTTCGACG GGCAACCGAT CGTGAAGGAT
TTCTCGCTCC GCGTGCTGCG CGGAGACCGC GTGGCCTTCG TCGGGCCGAA CGGGGTGGGC
AAGACGACGC TCCTGAAACT CCTCACCGGC GAGATGGAGC CCGATGCGGG CAGCGTGACG
CTCGGCACCA ACCTGCAGGT GGCGGTGTTC GATCAGACCC GCGCCCAGCT CGACCCCGAA
GCCTCGCTCT GGGACAGCCT GACGACCGAT CCCGCCATGC GTGTCTCGGG GCAGCAGGAT
CAGGTGCTGG TGCGCGGCCA GCCGCGCCAT GTGGTGGGCT ATCTCAAGGA TTTCCTCTTC
GACGAGCGGC AGGCCCGCGC GCCGGTGCGC TCCCTCTCGG GCGGCGAGAA GGCGCGGCTT
CTGCTCGCGC GGATCATGGC GCGCGAGTCG AACCTCCTGA TCCTCGACGA GCCGACCAAC
GATCTCGATG TCGAGACGCT CGATCTTTTG CAGGACATTC TCGGGGATTA CGAGGGCACG
GTGCTTCTCG TGAGCCACGA CCGCGACTTC ATCGACCGGG TGGCCACGAC CACGGTCGCG
CTCGAGGGGC AGGGCCGCGC CACCGTCTAT GCCGGCGGCT GGACCGACCA TCTGGCCCAG
CGGGGCGATG CCGCGCCCGC GGCCCCGCCG CGGGCCGAGC CCTCGCGCGA GGCCCCGAAG
GCCGCGCCGA AACCCGAGGC GCGCAAGCTC TCGGAAGGCC TCACCTTCAC CGAGCGCAAG
CGTCTCGACG CGCTTCCGGG CCTCATCGAG CGGCTCGAGG CCGAGATCGC GAAGCTCGGG
GAATTCCTGG CGGCCGACGA CCTCTTCACC CGCGAGCCGG TCAAGTTCCA GAAGGCCAGC
GAGGCGATGG CGGAGCGTCA GGCCCTTTTG TCGCAGGCCG AAGAGGAGTG GCTGACGCTG
GAAGACAAGG CCAGCAAAGG TTAG
 
Protein sequence
MARAPLLQLS GISLTFGGEP IFDGLDLVVQ PQDRVALVGR NGSGKSTLLK VMAGLVEPDR 
GERVVPAGTS VGYMEQDPDL SAFATLGDYA ASGLAHGEEY RVEMAAEGLK FRPETPVATA
SGGERRRAAL AKLMAEAPEL MLLDEPTNHL DIQAIQWLEA QLAETRTAFV LISHDRAFLR
ALSRATLWID RGQVRRREAG FEGFEEWREQ IWAEEDDQRH KLDRKIKAEA RWAVEGISAR
RKRNQGRLRA LAAMREERRS QIRRQGTAAL EFEAGTTSGK RVIEAKGITK AFDGQPIVKD
FSLRVLRGDR VAFVGPNGVG KTTLLKLLTG EMEPDAGSVT LGTNLQVAVF DQTRAQLDPE
ASLWDSLTTD PAMRVSGQQD QVLVRGQPRH VVGYLKDFLF DERQARAPVR SLSGGEKARL
LLARIMARES NLLILDEPTN DLDVETLDLL QDILGDYEGT VLLVSHDRDF IDRVATTTVA
LEGQGRATVY AGGWTDHLAQ RGDAAPAAPP RAEPSREAPK AAPKPEARKL SEGLTFTERK
RLDALPGLIE RLEAEIAKLG EFLAADDLFT REPVKFQKAS EAMAERQALL SQAEEEWLTL
EDKASKG