Gene Rsph17029_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1359 
Symbol 
ID4896844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1413066 
End bp1414091 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID640111946 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001043241 
Protein GI126462127 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.01104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGTCG CGGCGATCCT CCTGCGCCGC CTGGGCGCGC TTCTGGCCAC GGCCCTCTGC 
CTGAGCCTTC TCGTGTTCTG GCTGACCCAT CTGCCGCCGA ACCTCGAGAA GCTGGCGAAG
TCTCAGGGGT CGGCCCGCAT GTCCGACGCC GATGTGGCAA GCTGGCTCGA GCGGTCGGGC
TTCGACCGGC CGGTGCCCGT GCTCTACGGC GAGTGGCTGG GCCTCCTGCC GAAGGCGGGC
TGCGGCCGCT GCGGCGTGCT GCAGGGCGAC TGGGGCCAGT CCACCGTCTT CCGCCAGCCG
GTCGCCGAGG TGCTGGCCCG CAGTCTCGCC GCGACCGGCT GGCTCATGCT CTGGGTCATG
GTCGTGATGG TGCCCACGGC GCTGGCGCTC GGCGTGCTGG CCGGGATGCG CGAAGGCTCG
CGCACCGACC GCGCGATCTC GGTGGCCACG ATCCTGACCG CCGCCACGCC GGAATATGTC
TCGGGGGTGG TGCTGGTGGC GCTGTTCGCC TCGGCCACCG CCGGCCTGTC GCCCCTTCTG
CACGAGGCGG GCTGGATCGA GGGCCGCACG CTCTTTCAGG GCACGGCCTC GGGCGCCATG
AGCGGCATCA CCTTCTGGAA CTTCGCCCTG CCGGTGGTGA CGGTGGCGCT CTACGGGACG
GGCTATGTCG CGCGCATCAC CCGCGCGGCC ATGGCCGATG CGATGACGCA GCCCTATGTC
CGCACCGCCC GGCTGAAGGG CGCAAGCCAG AGCCGGATCG TGCTCGTCCA TGCGCTGCGC
AATGCGCTGG TGGCGCCAGT GACGGTGATC CTGCTGCAGC TGCCATGGCT TCTGAACGGG
GTCGTGATCG TTGAGACGCT CTTTGCCTAC AAGGGCTTCG GCTGGACGCT GGTGCAGGCC
GCGGGCAACA ACGACATAGA TCTGCTCCTC GGCTGCGCCA CGGTGGCGGT GACGCTGGTG
CTGGTCACGC AGGGCCTGTC CGACCTCGCC TATCGCGCGC TCAATCCCCG GCTGCGGGCG
CGCTGA
 
Protein sequence
MRVAAILLRR LGALLATALC LSLLVFWLTH LPPNLEKLAK SQGSARMSDA DVASWLERSG 
FDRPVPVLYG EWLGLLPKAG CGRCGVLQGD WGQSTVFRQP VAEVLARSLA ATGWLMLWVM
VVMVPTALAL GVLAGMREGS RTDRAISVAT ILTAATPEYV SGVVLVALFA SATAGLSPLL
HEAGWIEGRT LFQGTASGAM SGITFWNFAL PVVTVALYGT GYVARITRAA MADAMTQPYV
RTARLKGASQ SRIVLVHALR NALVAPVTVI LLQLPWLLNG VVIVETLFAY KGFGWTLVQA
AGNNDIDLLL GCATVAVTLV LVTQGLSDLA YRALNPRLRA R