| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1352 |
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| Symbol | |
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| ID | 4896799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1402790 |
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| End bp | 1404112 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640111939 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001043234 |
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| Protein GI | 126462120 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.47776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0441198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGT TTGGCAGGAT GGGACCGGGC GCCTGGATGG CGCTTGCAGC CGGGGGAGCG
GCGGCAGCCG GCGGGATCGG CTACTGGGGC TGGAGCGAGC GTGCGGCCGT GCCGCCGGAG
CCCGCCACGG TTCAGCAGCC CGCAGAGGCG CAACGCGCGG CGGTGGTGCC GGAGCCGTCC
CCAGCAGCGG CAGAGCCCGC CGCAAGCCCG ACGGTCCCCG GCACCGCCGT GCCAGAGGAT
GCGGCGGCAG TCCCTTCGCC GGCCGAGGAT CCGCCCGCCG GGGCAGACGA GCCCGAGGCG
GAGCAGGCGC TGGTGATCGA GCCTGCCTTC GACGTGGTCC GCATCGAGAG CGACGGCTCG
GCACTGGTGG CCGGGCGGGC GCAGCGCGGG GCCGAGGTCA CGGTGCTGGT CGAGGACGAA
GAGGCGGCCT CCACCACTGC GGATGCCGCG AACCGCTTCG CCGTCATGTT CACCCTTCCG
GCCGATGACC AGCCGCGGCG CCTCTCGCTG CGCATGGTGC TGCCGGACGG CACCGATTAC
GTCTCGACCG GCAGCGTCCT GATCGCGCCG ATCCTGACGC CGCCGCCTGC TCAGGTGGCC
TCGGCCGAGG CGGGGTCGGA CGCGGCGACG CAGGAGCCCG CCCCGACCCC CGTGCCGCGC
GCGCCCGCGG CGCTGCTTCT GGGCGATGGC AATGTGAAGG TGCTCCAGCC CGCCGGTGAG
GCGCTCGAGG ATCTCGCGGG CGTCTCCGTC GACACGATCT CCTATGGCCC GGATGGCTCG
GTGCTTCTGT CGGGCCGGGG CGGCGAGGGG GATTTCGTCC GGCTCTACCT CGACAACCGC
GAGATCGCGA CCGTGACCAT CGCGCCGGAC GGCACATGGG GGGTGAGCCT GACGGGGATC
GAGCCCGGCC GCTACGCGCT TCGGGCCGAC AGGATCGATC CCGAAGGCGA GGTGGTGGCC
CGGTTCGAGA CGCCCTTCGC GCGCGAAACC CACGAGACGG TGGCCGCCGC GCTCGAGGCG
CAGAGCCGGC CCGGCGGCGC GCCGGGTGGA GAAGCGTCGC CCGCCGTGCC GGGCGCGGAA
GGAGCGCCGC CCGCGGGCGG GCCGGGCGCG GGCCTCACGG CCTCGGCCGA GGGCGAGCCT
CCGAGTGGCG CGCCGGTCTC GGTCACCGTG CAGCCGGGCT TCTCGCTCTG GCGCATCGCC
GAGGAGACCT TCGGCGAGGG CATCCTCTAT GTGAAGGTCT ATGAGGCCAA TCGCACGGCG
ATCCGCGACC CCGACCTGAT CTATCCGGGG CAGGTCTTCA CCCTTCCGGC ACCGACGGAC
TGA
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| Protein sequence | MPLFGRMGPG AWMALAAGGA AAAGGIGYWG WSERAAVPPE PATVQQPAEA QRAAVVPEPS
PAAAEPAASP TVPGTAVPED AAAVPSPAED PPAGADEPEA EQALVIEPAF DVVRIESDGS
ALVAGRAQRG AEVTVLVEDE EAASTTADAA NRFAVMFTLP ADDQPRRLSL RMVLPDGTDY
VSTGSVLIAP ILTPPPAQVA SAEAGSDAAT QEPAPTPVPR APAALLLGDG NVKVLQPAGE
ALEDLAGVSV DTISYGPDGS VLLSGRGGEG DFVRLYLDNR EIATVTIAPD GTWGVSLTGI
EPGRYALRAD RIDPEGEVVA RFETPFARET HETVAAALEA QSRPGGAPGG EASPAVPGAE
GAPPAGGPGA GLTASAEGEP PSGAPVSVTV QPGFSLWRIA EETFGEGILY VKVYEANRTA
IRDPDLIYPG QVFTLPAPTD
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