| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1303 |
|---|
| Symbol | |
|---|
| ID | 4896435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 1350442 |
|---|
| End bp | 1352247 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640111890 |
|---|
| Product | phosphogluconate dehydratase |
|---|
| Protein accession | YP_001043185 |
|---|
| Protein GI | 126462071 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGA ACGCCACTGT CGCCCGCGTC ACCGACCGTA TCCGCGCCCG CTCGGAAGCG
AGCCGCGGCG CCTATCTCGA GCGCACGGGA CGCGCGGCCG AGGCGGGTCC GGTCCGCGCG
CATCTGACCT GCGGCAACCA GGCCCATGCC TATGCGGCGA TGGGCGAGGA CAAGGAGGCG
CTGGCCGCGG GGCGGGCGCC GAACCTCGGG ATCGTGACCG CCTACAACGA CATGCTGTCG
GCCCATCAGC CCTACGAGGA TTATCCCAGG CTGATCCGGG CCGCCGCGCG CCGGGCGGGC
GCCACGGCAC AGGTGGCGGG CGGGGTGCCG GCCATGTGCG ACGGGGTCAC GCAGGGCCAG
CCGGGGATGG AGCTGTCGCT CTTCTCGCGC GACGTGATCG CGCTGGCGGC GGGCGTGTCG
CTCTCGCACA ACTGCTACGA TGCGGCGCTC TTTCTCGGGA TCTGCGACAA GATCGTTCCG
GGCCTCGTGA TGGCGGCGGC GACCTTCGGC CATGTGCCGG CGGTCTTCGT GCCGGGCGGC
CCCATGACTT CGGGCCTGCC CAATGACGAG AAGTCGCGCG TGCGCAACCA GTTCGCGACC
GGCGAGGTGG GGCGCGAGGC GCTGATGGCG GCCGAGATGG CCTCCTACCA CGGCCCCGGC
ACCTGCACCT TCTACGGCAC GGCCAACACC AACCAGATGC TGATGGAATT CATGGGGCTC
CACCTGCCGG GGGCGAGTTT CGTCAACCCG AACACCCCCC TGCGCGAGGC GCTGACGGTG
GCCGCGGTCG AGCGCGCCGC GGCCATCACC GCGCTCGGCA ACGATTATCG CCCAGTGGGG
CAGATCCTCG ACGAACGCGC CTTCGTGAAC GGGCTCGTGG GGCTGATGGC GACGGGGGGG
TCGACCAACC TCGTGCTGCA CCTGCCTGCC ATGGCGCGGG CCGCGGGCGT TCTCCTCGAT
CTGGAGGATT TCGCCGACAT TTCCGAGGTC GTGCCGCTGA TGGCCAAGGT CTATCCGAAC
GGCATGGCCG ACGTGAACCA CTTCCATGCG GCGGGCGGTC TGCCCTACAT GATCGGCCAG
CTCCTCGATG CGGGCCTCCT GCACGAAGAG GTGCAGACGG TCGCGGGCGA CGGTCTGAGC
CTCTACCGGC GCGAGCCGGT GCTGACCGAG GACGGCCTCG TCTGGCGCGA CGGGCCGGAC
GCCTCGCAGA ACGACCGTAT CCTGCGCCCG GCGACCGAGC CGTTCCAGCC CTCGGGCGGG
CTGCGCCAGC TGTCGGGCAA CCTCGGGCGC GGCGTGATGA AGGTCTCGGC CGTGGCGCCC
GACCGCCATG TGATCGAGGC ACCGGCCCGG ATCTTCCACG ATCAGGAGGC GGTCAAGGCC
GCCTTCCGGG CGGGAGAGTT CACCACGGAC ACCGTGGTGG TGGTGCGCTT CCAGGGCCCG
CGCGCCAACG GGATGCCCGA GCTGCATTCG CTGACGCCGG TGCTCTCGGT GCTGCAGGAT
CGTGGCCTGC GCGTGGCGCT GGTGACCGAT GGGCGCATGT CGGGGGCCTC GGGCAAGGTG
CCCTCGGCGA TCCATGTCGC ACCCGAGGCG GCGATGGGCG GCCCGCTTGC CCGCCTCCGG
AACGGCGATC TCCTGCGGGT GGATGCGACG ACGGGCCGGC TCGATGTCCT GGCCGAGGGT
TTCGAGGATC GGATTCCGGT CGAGGCCGAC CTCTCCGCCT CCGCCCACGG CATCGGCCGC
GAGCTTTTCG CGGCCTTCCG AGCCACGGTG AGTTCCGCAA CCGAAGGCGC GGCCGTGGTC
GTCTGA
|
|---|
| Protein sequence | MTLNATVARV TDRIRARSEA SRGAYLERTG RAAEAGPVRA HLTCGNQAHA YAAMGEDKEA
LAAGRAPNLG IVTAYNDMLS AHQPYEDYPR LIRAAARRAG ATAQVAGGVP AMCDGVTQGQ
PGMELSLFSR DVIALAAGVS LSHNCYDAAL FLGICDKIVP GLVMAAATFG HVPAVFVPGG
PMTSGLPNDE KSRVRNQFAT GEVGREALMA AEMASYHGPG TCTFYGTANT NQMLMEFMGL
HLPGASFVNP NTPLREALTV AAVERAAAIT ALGNDYRPVG QILDERAFVN GLVGLMATGG
STNLVLHLPA MARAAGVLLD LEDFADISEV VPLMAKVYPN GMADVNHFHA AGGLPYMIGQ
LLDAGLLHEE VQTVAGDGLS LYRREPVLTE DGLVWRDGPD ASQNDRILRP ATEPFQPSGG
LRQLSGNLGR GVMKVSAVAP DRHVIEAPAR IFHDQEAVKA AFRAGEFTTD TVVVVRFQGP
RANGMPELHS LTPVLSVLQD RGLRVALVTD GRMSGASGKV PSAIHVAPEA AMGGPLARLR
NGDLLRVDAT TGRLDVLAEG FEDRIPVEAD LSASAHGIGR ELFAAFRATV SSATEGAAVV
V
|
|---|
| |