Gene Rsph17029_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1295 
Symbol 
ID4896347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1341531 
End bp1342448 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID640111882 
ProductCaCA family Na(+)/Ca(+) antiporter 
Protein accessionYP_001043177 
Protein GI126462063 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCTACA TCCTGTTTGT CGCGGGCCTT CTGGGCCTTT TCTTCGGAGG CGAATTTCTC 
GTGCGGGGTG CGGCCAATGT CGCGCGGTCC TACCGGATCA GCCCCATGGT CATCGGCCTG
ACCATCGTGG GCTTCGGAAC CTCGACGCCC GAGCTTCTGG TCTCGCTCAA CGCGGCGCTG
GACGGCGCCT CCTCCATCGC GGTCGGAAAC GTTCTCGGCT CGAACATCGC CAACATCCTC
CTGATCCTCG GCCTCACCGC GCTGATCTAT CCGGTGGCCG TCGACGGACG GCGGGTCTGG
AAGGATCTGG CCTTCATGGT GGGCGCGACC GTCCTTCTGT GGATCATGCT GCTGGGCGAC
GGGCTGTCGC GGATCGAGGC GGGCGTGCTG GTGGCGGCGC TGGCGGGCTT TCTCGTCTCG
TCCTTCCTCT CCGGGCGCAC CGAGGAGGAG GAGACCGACC CCGAGGCGCT GACGCCGGTC
TGGAAGTCGG CCCTCATCAC GCTCGGCGGG CTCGTGGTGC TGATGGTGGG CGCGCGGCTT
CTCGTGGACA GCTCGACCCA GATCGCCCGC TCCTTCGGCA TCTCCGAGGC GGTGATCGGC
CTGACCATCG TCGCGGTCGG CACGTCGCTG CCCGAACTGG CCACTTCGGC CATCGCGGCC
TGGCGCAAGC ATTCCGAGAT CGCCGTCGGC AACGTGATCG GATCGAACAT CTTCAACGTG
CTGGGGATCC TCGGAATCAC CGGGCTCGTC CTGCCGATCC AGGGGCTCGA CCCGCGCTTC
CTGCGCGAGG ACATGCCTTG GGTTCTGGGC TGCTCGCTCC TTCTCGTGCT CATGGCCTTT
GCGCTCAAGG GCGTGCCCCG CTGGGCCGGG GCGCTGCTGC TGGCGGCCTA CGGGGGCTAT
GTGGCGCTGA TGCTCTGA
 
Protein sequence
MVYILFVAGL LGLFFGGEFL VRGAANVARS YRISPMVIGL TIVGFGTSTP ELLVSLNAAL 
DGASSIAVGN VLGSNIANIL LILGLTALIY PVAVDGRRVW KDLAFMVGAT VLLWIMLLGD
GLSRIEAGVL VAALAGFLVS SFLSGRTEEE ETDPEALTPV WKSALITLGG LVVLMVGARL
LVDSSTQIAR SFGISEAVIG LTIVAVGTSL PELATSAIAA WRKHSEIAVG NVIGSNIFNV
LGILGITGLV LPIQGLDPRF LREDMPWVLG CSLLLVLMAF ALKGVPRWAG ALLLAAYGGY
VALML