Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1290 |
Symbol | |
ID | 4896340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1335515 |
End bp | 1337485 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640111877 |
Product | cytochrome c-type biogenesis protein CcmF |
Protein accession | YP_001043172 |
Protein GI | 126462058 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1138] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.595992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTCG AACTCGGCCA TTTCGCGCTG GTGCTGTCGC TGGCTGTGGC CCTTGTGCAG TCCGTGGTGC CGCTCGTCGG CGCGGATCGG CGCTGGTCGG GCTGGATGGC GGTGGCCGAA CCCGCGGCGG TCACCCAGCT TCTGCTGATC GGCTTCTCCT TCGCCGCGCT GACCTGGGCC TTCGTGACCT CGGATTTCTC GGTGCGCCTC GTCGTGCTGA ACTCGCACAC GCTGAAGCCC ATGCTCTACA AGATCAGCGG CGTCTGGGGG AACCACGAGG GCTCGCTGCT TCTGTGGGTG CTGATCCTCG CCCTGTTCGG AGCCTGCGCC GCGGTCTTCG GGCAGAACCT GCCGCCCACG CTCAAGGCGC GCGTGCTGGC GGTGCAGGGG ATGATCGGCG CGGCCTTCCT GGCCTTCCTC CTCTTCACCT CGAACCCGTT CCTGCGCATG GGCGAGGTGC CCTTCGACGG CGAGGATCTG AACCCGCTCC TGCAGGATCC CGGGCTCGCC TTCCACCCGC CCTTCCTTTA CCTCGGCTAT GTCGGCCTCT CGATGGCCTT CTCCTTCGCG GTGGCGGCCC TGATCGAGGG CCGCGTCGAT GCCGCCTGGG GACGCTGGGT CCGGCCCTGG ACGCTCGCCG CCTGGGTGTT TCTCACCATC GGCATCGCGC TCGGCTCCTG GTGGGCCTAT TACGAGCTCG GCTGGGGCGG TTTCTGGTTC TGGGACCCGG TCGAGAACGC CTCCTTCATG CCCTGGCTGA TCGCGGCGGC GCTGCTCCAT TCGGCCATCG TGGTCGAGAA GCGCGAGGCG CTGAAGAGCT GGACGATCCT GCTGGCCATC CTCGCCTTCG GCTTCTCGCT GATCGGCACC TTCATCGTGC GCTCGGGCGT CATCACCTCC GTCCATGCCT TCGCCAACGA TCCCGAGCGC GGGATCTTCA TCCTGATGAT CCTCGCGGTC TTCATGGGCG GGGCGCTCAC GCTCTTCGCC GCGCGGGCGA GCGCCATGGA GGCCAAGGGG GTCTTCGGCA TCGTCAGCCG CGAGTCGGGC CTCGTGCTGA ACAACGTGCT GCTGACGGTG GCCTGTTTCG TGGTCTTTAT CGGCACGATC TGGCCGCTCC TCGCCGAACT CCTCTGGGGC CGCAAGCTGT CGGTGGGCGC GCCCTTCTTC AATGCAGCCT TCACCCCCTT CATGGTGGTG ATCGCCCTCG TCCTGCCTCT GGGCGCCGTC CTGCCCTGGA AGCGGGCCGA GCTCGGCCGC GGGATGCGGC CGCTCTGGGG GGCGCTCGCG CTCTCGGCGG CCCTGGGTGC GCTGGTCTTC GCGCTCCAGA CGGGCCGGTC GGCGCTCGGG CCCGTCGGCC TCGCGCTCGG CGCCTGGCTC GTCTTCGGCA CGCTCCTCGA CCTCTGGGGC CGCACCGGGC GCGGCGCGCT CGGCGGGCGG CTCGCGCGCC TCCGGCGGCT GCCGCGCGCG GACTGGGGCA AGGCCACCGC CCATGCGGGC CTCGGCGTCA CGATCTTCGC CGTGGCGGCC ATCACCGCCT GGCAGGTCGA GTCGATCCGC GTGATGAAGC CGGGCGAGAC CTTCGCCCTC GGCCGCTACG ATGTCCTGCT CGAGGGCGTG CGCGAGATCG AGGGGCCGAA CTACCGCTCG ACCGTGGCCG ACTTCCGCGT GACCCGCGAC GGGGCCGAAG TGGCGACGCT CCATCCCGAG AAGCGCGTCT ATCCGGTGGC CGCCATGCCC ACGACCGAAG CCGCCATCGA CTACGGCTTC ACCCGCGACC TCTACCTCGT GATCGGCGAC CCGCAGGAGG GCGGCGGCTA TGCGGTGCGC AGCTACATCA AGCCCTTCGC CAACTGGATC TGGGGCGGCG CGCTGCTGAT GGCGCTCGGC GGGCTTCTGA GCCTCTCGGA CCGTCGCTAC CGCATCGCCG CAGGGGCGCG CCGGATGCCG GCCGCGGTGG CTGCAGAATG A
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Protein sequence | MIVELGHFAL VLSLAVALVQ SVVPLVGADR RWSGWMAVAE PAAVTQLLLI GFSFAALTWA FVTSDFSVRL VVLNSHTLKP MLYKISGVWG NHEGSLLLWV LILALFGACA AVFGQNLPPT LKARVLAVQG MIGAAFLAFL LFTSNPFLRM GEVPFDGEDL NPLLQDPGLA FHPPFLYLGY VGLSMAFSFA VAALIEGRVD AAWGRWVRPW TLAAWVFLTI GIALGSWWAY YELGWGGFWF WDPVENASFM PWLIAAALLH SAIVVEKREA LKSWTILLAI LAFGFSLIGT FIVRSGVITS VHAFANDPER GIFILMILAV FMGGALTLFA ARASAMEAKG VFGIVSRESG LVLNNVLLTV ACFVVFIGTI WPLLAELLWG RKLSVGAPFF NAAFTPFMVV IALVLPLGAV LPWKRAELGR GMRPLWGALA LSAALGALVF ALQTGRSALG PVGLALGAWL VFGTLLDLWG RTGRGALGGR LARLRRLPRA DWGKATAHAG LGVTIFAVAA ITAWQVESIR VMKPGETFAL GRYDVLLEGV REIEGPNYRS TVADFRVTRD GAEVATLHPE KRVYPVAAMP TTEAAIDYGF TRDLYLVIGD PQEGGGYAVR SYIKPFANWI WGGALLMALG GLLSLSDRRY RIAAGARRMP AAVAAE
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