Gene Rsph17029_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1287 
Symbol 
ID4896335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1330740 
End bp1333463 
Gene Length2724 bp 
Protein Length907 aa 
Translation table11 
GC content67% 
IMG OID640111874 
ProductDNA gyrase subunit A 
Protein accessionYP_001043169 
Protein GI126462055 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.454122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGAC CGCTGAGCGG ACTGCCGCAG GTCTCCATCG CCGAGGAGAT GAAGACCGCC 
TATCTCGATT ATGCGATGAG CGTCATCGTC AGCCGCGCGA TCCCCGATCT GCGCGACGGG
CTGAAGCCGG TGCACCGCCG CATCCTCTAT GCGATGCACG AAACGGGGAA CACGTCGGAC
AAGCCCTACC GCAAGTCGGC GCGCCCGGTG GGCGACACGA TGGGGAAATA CCACCCCCAC
GGAGACGGCG CGATCTATGA CGCGCTGGTG CGGATGGCGC AGCCCTTCTC GATGGGGCTG
AAGCTTCTGG ACGGTCAGGG CAACTTCGGC TCGATGGACG GCGACAATGC CGCGGCCATG
CGCTACACCG AAGTGCGGAT GGACAAGCCC GCGGCCTTCC TGCTGGCCGA TATCGACAAG
GATACGGTCG ACTTCCAGGA CAATTACGAC GGCAAGGATC GCGAACCCAC CGTCCTGCCC
GCGCGCTTTC CGAACATGCT GGTCAATGGC GCGGGCGGCA TCGCCGTCGG CATGGCCACC
AACATCCCGC CGCACAACCT CGGCGAAGTG GTGGATGCCA CGCTCGCCAT GATCGAGAAC
CCCGACATCT CGACCGAGCG GCTGATGGAG ATCATCCCCG GCCCCGACTT CCCGACGGGT
GGCGTGATCC TCGGACGCTC CGGCGCCCGC AAGGCCTATC TCGAGGGGCG CGGCTCGGTC
ATCATGCGGG CGAAGGCCCG GGTCGAGGAG ATCCGCAAGG ATCGCTATGC GATCGTGCTC
GACGAGATCC CCTATCAGGT CAACAAGGCC ACGATGATCG AGAAGATCGC GGACATGGTC
CGCGAGAAGA AGATCGAGGG CATCGCCCAT GTGCAGGACG AATCCGACCG GGTCGGCGTC
CGCGTGGTGA TCGAACTCAA GCGCGACGCC ACGCCCGAGG TGGTGCTGAA CCAGCTCTGG
CGCTTCACGC CGATGCAGAC CACCTTCGGC TGCAACATGC TGGCGCTGAA CGGCGGCCGG
CCCGAGCAGC TCACGCTGCG TGATTTCCTG AGCCACTTCC TGACCTTCCG CGAGGATGTG
GTGGCGCGCC GCACGGCCTA TGAGCTGCGC AAGGCACGCG AGCGGAGCCA CATCCTCTGC
GGCCTCGCCG TCGCGGTCTC GAACGTGGAC GAAGTGGTGG CCACGATCCG CAGCTCGGCC
GATCCGGCCG AGGCGCGCGA GCGGCTGATG ACCCGGCGCT GGCCCGCGGC CGACATCGCC
GATTATATCC GGCTGATCGA CGATCCGTCG CACACGATCA ACGAGGACGG CACATACAAC
CTCTCCGAGA TCCAGGCGCG CGCGATCCTC GACCTGCGCC TTCAGCGCCT GACGGCGATG
GGCGTGAAGG AAGTCACCGA CGAACTCGCG GAACTCGCCG CGAAGATCCG CGACTATCTT
GACATCCTCG GCTCGCGCGA GCGGATCATG GCGATCATCT CGGACGAGCT GCGCGAGGTG
AAGGACCTCT TCGCCGTGCC GCGCCGGACC GAGATCTCGG AATGGGCGGG CGATCTCGAG
GACGAGGACC TGATCGAGCG CGAGGACATG GTGGTGACCA TCACCTCGGG CGGCTACATC
AAACGCACCC CGCTCGCCGA ATTCCGCAGC CAGCGCCGCG GCGGCAAGGG GCTCGCCTCG
ATGGCGACCA AGGAAGACGA CGTGGTAACG ACGCTCTTCG TCGCCAACAC CCACACGCAG
CTTCTGTTCT TCACCACCGA CGGCATGGTC TACGACCTCA AGTGCTGGCG GTTGCCGCTC
GGCGGGCGGA CGGCGAAGGG CAAGGCCATC GTCAACATCC TGCCCATCGC GACCGGCATC
AGCATCGCTG CGCTGATGAA GATCGACGAG CCAGAGGAGG AATGGGATCG CCTGCAGGTG
GTCTTCGCCA CCTCCGAGGG CGACGTGCGC CGCAACCGGC TGTCGGACTT CACCAACGTG
AAGCGGAACG GCAAGATCGC GATGAAGCTG CCCGAGGGTG TGAGCCTCGT GAATGTCTCG
ATCTGCGACG AGCAGGACGA TGTGATGATG GTCACGGCGC TCGGCCGGGC GATCCGCTTC
TCCACCACCG ACGTGCGGGT CTTCTCGGGC CGCGACTCGA CCGGCGTGCG CGGCATCCGC
CTCGCCTCGG GCGACCGGGT CGTCTCCATG TCGGTCATCC GGCATTTCGA GGCCGATCCG
GCCGAACGCG CGGCCTATCT CAAGCAGCGC CGTCTGATGG CGGGCGTGAC CGAGGAGGCC
GAGGCCGACG AGGAGGAAGA TGCGGTCGAG GCGGGCCAGC TCTCGCCCAC CCGCTATGCC
GAGATGTCGG CGGCCGAGGA TCTGATTCTC ACCATCACCG CGCGGGGCTT GGGCAAGATC
TCGTCGAGCC ACGATTATCC GGTCCGCGGC CGCGGCGGCC AGGGCGTCAC CGCCTTCGAG
AAGTCGATGC GCGGCGGCCA GCTCGTGGCC TCGTTCCCGG TCGAGATGAG CGATCAGGTG
ATGCTCGCCA CCTCGGGCGG CCAGTCGATC CGGGTGCCGG TTGAGCAGAT CAGCTTCCGC
TCGCGCTCGG CCGGCGGCGT GCGCGTCTTC GACACCGGGG CCAGCGAAGA GGTCGTCTCG
GTGGCGCGGA TCGCCGATGC GGGCGACACG GCCGAGGGGG TCGAAGATGC GGAGCCCGGC
GAGACCGGCG GCGACGAGGC CTGA
 
Protein sequence
MGRPLSGLPQ VSIAEEMKTA YLDYAMSVIV SRAIPDLRDG LKPVHRRILY AMHETGNTSD 
KPYRKSARPV GDTMGKYHPH GDGAIYDALV RMAQPFSMGL KLLDGQGNFG SMDGDNAAAM
RYTEVRMDKP AAFLLADIDK DTVDFQDNYD GKDREPTVLP ARFPNMLVNG AGGIAVGMAT
NIPPHNLGEV VDATLAMIEN PDISTERLME IIPGPDFPTG GVILGRSGAR KAYLEGRGSV
IMRAKARVEE IRKDRYAIVL DEIPYQVNKA TMIEKIADMV REKKIEGIAH VQDESDRVGV
RVVIELKRDA TPEVVLNQLW RFTPMQTTFG CNMLALNGGR PEQLTLRDFL SHFLTFREDV
VARRTAYELR KARERSHILC GLAVAVSNVD EVVATIRSSA DPAEARERLM TRRWPAADIA
DYIRLIDDPS HTINEDGTYN LSEIQARAIL DLRLQRLTAM GVKEVTDELA ELAAKIRDYL
DILGSRERIM AIISDELREV KDLFAVPRRT EISEWAGDLE DEDLIEREDM VVTITSGGYI
KRTPLAEFRS QRRGGKGLAS MATKEDDVVT TLFVANTHTQ LLFFTTDGMV YDLKCWRLPL
GGRTAKGKAI VNILPIATGI SIAALMKIDE PEEEWDRLQV VFATSEGDVR RNRLSDFTNV
KRNGKIAMKL PEGVSLVNVS ICDEQDDVMM VTALGRAIRF STTDVRVFSG RDSTGVRGIR
LASGDRVVSM SVIRHFEADP AERAAYLKQR RLMAGVTEEA EADEEEDAVE AGQLSPTRYA
EMSAAEDLIL TITARGLGKI SSSHDYPVRG RGGQGVTAFE KSMRGGQLVA SFPVEMSDQV
MLATSGGQSI RVPVEQISFR SRSAGGVRVF DTGASEEVVS VARIADAGDT AEGVEDAEPG
ETGGDEA