| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1286 |
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| Symbol | |
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| ID | 4896336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1329402 |
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| End bp | 1330736 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640111873 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_001043168 |
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| Protein GI | 126462054 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.474706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT GCCTGCATAT CGTGGGAGCC GGCATGGCCG GCTCCGAGGC CGCATGGCAG
GCCGCCGAAA TGGGCGTGCC CGTCGTGCTG CACGAGATGC GGCCGAAGGT GGGCACCTTC
GCCCACCGCA CCGGCCAGTT CGCCGAGATG GTCTGCTCGA ACTCGTTCCG TTCGGACGAT
GACGAGCGCA ATGCCGTGGG CCTCCTTCAT TGGGAGATGC GGGCCGCGCG CGGGCTCATC
ATGGAGATGG CCGCGGCCCA CCGGCTACCG GCGGGCGGCG CGCTCGCCGT GGACCGCGAT
CCCTTTGCGG AGAGCGTGAC GGCGCGGCTG CGGGCACATC CGCTGATTTC TGTGGTGGAA
GAAGAGGTTG CCGAGCTTCC TTCGAGCGGC AACTGGATTG TGGCCACGGG GCCGCTCACC
TCGTCCGCGC TGGCCGAAAG CCTGCGGGCG CTCACCGGGG CCGAGGCACT GGCCTTCTTC
GACGCCATCG CCCCCATCGT CTATGCCGAG ACCATCGACA TGGAGGTGGC CTGGCGGCAG
TCGCGCTACG ACAAGGGCGA AACCGAGGAC GAGCGCACCG CCTACATCAA CTGTCCGATG
AACCGGGAGC AATACGAGGC CTTCATCGAC GCGCTGCTCG CGGCCGAAAA GACCGAGTTC
CACGAGGGCG AGACCGCAGG TTATTTCGAC GGTTGCCTGC CCATCGAGGT GATGGCCGAG
CGCGGGCGCG AGACCCTGCG CCATGGGCCG ATGAAGCCTG TGGGCCTGAC AAACAGCCAC
CGGCCCGCCG AAAAGGCTTA TGCCGTGGTC CAGCTGCGGC GGGACAACAA GCTGGGCACG
CTCTACAATA TCGTGGGCTT CCAGACGAAG ATGAAATACG GCGCGCAAAC CGCTGTTTTC
AAGATGATTC CGGGGCTCGA GAATGCGAGC TTCGCCCGGC TGGGCGGCAT CCACCGCAAC
ACCTTCCTGA ACTCTCCCAC CCTGCTCGAT GACCGGATGC GGCTGAAGCT CAGACCGAAC
ATCCGCTTCG CCGGGCAAGT CACGGGCGTG GAAGGATATG TCGAGAGCGC GGCCATGGGG
CTTCTGGCCG GGCGGATGGC TGCGGCCGAG ATCCTCGGGC GCGACCTGCC GCCGCCGCCG
CCCGAGACGG CGATGGGCGC GCTGGTCACG CACATCACCG GCGGCGCCGA GGCGAAGAGC
TTCCAGCCGA TGAACGTGAA CTTCGGCCTC TTCCCGCCCA TCGACGCCAG GGGCGGCCGG
CGCGGGCGCA AGGACCGCTA CAAGGCCTAC ACCGACCGGG CGAAGGCGGC CTTCACGGAA
TGGCTGGGCG CGTAA
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| Protein sequence | MAECLHIVGA GMAGSEAAWQ AAEMGVPVVL HEMRPKVGTF AHRTGQFAEM VCSNSFRSDD
DERNAVGLLH WEMRAARGLI MEMAAAHRLP AGGALAVDRD PFAESVTARL RAHPLISVVE
EEVAELPSSG NWIVATGPLT SSALAESLRA LTGAEALAFF DAIAPIVYAE TIDMEVAWRQ
SRYDKGETED ERTAYINCPM NREQYEAFID ALLAAEKTEF HEGETAGYFD GCLPIEVMAE
RGRETLRHGP MKPVGLTNSH RPAEKAYAVV QLRRDNKLGT LYNIVGFQTK MKYGAQTAVF
KMIPGLENAS FARLGGIHRN TFLNSPTLLD DRMRLKLRPN IRFAGQVTGV EGYVESAAMG
LLAGRMAAAE ILGRDLPPPP PETAMGALVT HITGGAEAKS FQPMNVNFGL FPPIDARGGR
RGRKDRYKAY TDRAKAAFTE WLGA
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