Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1255 |
Symbol | |
ID | 4896197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1301277 |
End bp | 1302257 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640111841 |
Product | ABC transporter, periplasmic substrate-binding protein |
Protein accession | YP_001043137 |
Protein GI | 126462023 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.113577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCC TTTTCGCCCT GCTTCTGCTG GCCGTCGCCG CCCCGGCCGC GGCCGAGCCC TTCCGTCTCA TCGTGAGCGA TCTCGAGACG CCGCTGGTGC CGAATTCCGT GATGGATCTG GCGCTGGCCA ACGGCTATTT CGAGCGCGCC GGCGTCGAGG TGGAGCTGGT GCGCGTGCAG CAGACGCCGA TGGCGCTGGC CGCGCTGCAG GCGGGCGAAG GCGAGATGGC CAATGTCTCG ACGGATGCGC TGCTGCAACT CGCCGCCCGC GGCACGACCG ATCTGCGCGC GGTGATGTCG CCCAACAAGG CGCTGCCCTT CCTGATCGCG GCGAAGCCCG AGATCGAGAC GCCCCGCGCG CTCGAAGGCC GCAGCTTCGG CATCGGCCGG GTGGGCTCGC TCGACCATTC GCTGAGCGCG AAGGTCCTGG CGGCCCAAGG CGTCGATGTC TCGAAGCTGA ACCTCGTGCC GCTGGGCCAG CCCGCGGTCC GGGCGCAGGC GCTGATGGCG GGTCAGGTGG ATGCCACCAC CATGTCGATC GGAACATGGA CGGCCATGCC GGATCGCGAA GGCCTGCGGA TCCTCGTGGG CATGGACGCT TATTTCGCGG CCGCCCCGGT CACGACCAAG GTCAATGCGG TTACGTCCGA GGTTCTCGAG AACCGCCGGG CGGAGGTCGA GGCGGTGATC GAGGCGCTGG TGCTGGCCGC ACGCGATTTC CAGGATCCCG CGACGTGGGT CGAGCGGATG GCGGTGGCGC GCCCCGACGT GCCGCGAGCC GATCTCGAGG AACTGGCCCG CGCCTACCGC AACAGCTGGA GCATCGATGG CGGGTTCACG CGCGAGGAAC TGAAGGTGAC GACGGAATGG ATGTATGGCA CCGAGGATTT CCAGGGTCTC CGCCCGGTCG GGCTGGAGGA ATGGACGGAC TTCGGGCCGC TGGAGACGGT GCTGCAGAAG CTCGGCCCGG CGCAGGGGTG A
|
Protein sequence | MKRLFALLLL AVAAPAAAEP FRLIVSDLET PLVPNSVMDL ALANGYFERA GVEVELVRVQ QTPMALAALQ AGEGEMANVS TDALLQLAAR GTTDLRAVMS PNKALPFLIA AKPEIETPRA LEGRSFGIGR VGSLDHSLSA KVLAAQGVDV SKLNLVPLGQ PAVRAQALMA GQVDATTMSI GTWTAMPDRE GLRILVGMDA YFAAAPVTTK VNAVTSEVLE NRRAEVEAVI EALVLAARDF QDPATWVERM AVARPDVPRA DLEELARAYR NSWSIDGGFT REELKVTTEW MYGTEDFQGL RPVGLEEWTD FGPLETVLQK LGPAQG
|
| |