Gene Rsph17029_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1255 
Symbol 
ID4896197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1301277 
End bp1302257 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content69% 
IMG OID640111841 
ProductABC transporter, periplasmic substrate-binding protein 
Protein accessionYP_001043137 
Protein GI126462023 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.113577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC TTTTCGCCCT GCTTCTGCTG GCCGTCGCCG CCCCGGCCGC GGCCGAGCCC 
TTCCGTCTCA TCGTGAGCGA TCTCGAGACG CCGCTGGTGC CGAATTCCGT GATGGATCTG
GCGCTGGCCA ACGGCTATTT CGAGCGCGCC GGCGTCGAGG TGGAGCTGGT GCGCGTGCAG
CAGACGCCGA TGGCGCTGGC CGCGCTGCAG GCGGGCGAAG GCGAGATGGC CAATGTCTCG
ACGGATGCGC TGCTGCAACT CGCCGCCCGC GGCACGACCG ATCTGCGCGC GGTGATGTCG
CCCAACAAGG CGCTGCCCTT CCTGATCGCG GCGAAGCCCG AGATCGAGAC GCCCCGCGCG
CTCGAAGGCC GCAGCTTCGG CATCGGCCGG GTGGGCTCGC TCGACCATTC GCTGAGCGCG
AAGGTCCTGG CGGCCCAAGG CGTCGATGTC TCGAAGCTGA ACCTCGTGCC GCTGGGCCAG
CCCGCGGTCC GGGCGCAGGC GCTGATGGCG GGTCAGGTGG ATGCCACCAC CATGTCGATC
GGAACATGGA CGGCCATGCC GGATCGCGAA GGCCTGCGGA TCCTCGTGGG CATGGACGCT
TATTTCGCGG CCGCCCCGGT CACGACCAAG GTCAATGCGG TTACGTCCGA GGTTCTCGAG
AACCGCCGGG CGGAGGTCGA GGCGGTGATC GAGGCGCTGG TGCTGGCCGC ACGCGATTTC
CAGGATCCCG CGACGTGGGT CGAGCGGATG GCGGTGGCGC GCCCCGACGT GCCGCGAGCC
GATCTCGAGG AACTGGCCCG CGCCTACCGC AACAGCTGGA GCATCGATGG CGGGTTCACG
CGCGAGGAAC TGAAGGTGAC GACGGAATGG ATGTATGGCA CCGAGGATTT CCAGGGTCTC
CGCCCGGTCG GGCTGGAGGA ATGGACGGAC TTCGGGCCGC TGGAGACGGT GCTGCAGAAG
CTCGGCCCGG CGCAGGGGTG A
 
Protein sequence
MKRLFALLLL AVAAPAAAEP FRLIVSDLET PLVPNSVMDL ALANGYFERA GVEVELVRVQ 
QTPMALAALQ AGEGEMANVS TDALLQLAAR GTTDLRAVMS PNKALPFLIA AKPEIETPRA
LEGRSFGIGR VGSLDHSLSA KVLAAQGVDV SKLNLVPLGQ PAVRAQALMA GQVDATTMSI
GTWTAMPDRE GLRILVGMDA YFAAAPVTTK VNAVTSEVLE NRRAEVEAVI EALVLAARDF
QDPATWVERM AVARPDVPRA DLEELARAYR NSWSIDGGFT REELKVTTEW MYGTEDFQGL
RPVGLEEWTD FGPLETVLQK LGPAQG