| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1251 |
|---|
| Symbol | |
|---|
| ID | 4896176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1297860 |
|---|
| End bp | 1299293 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640111837 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001043133 |
|---|
| Protein GI | 126462019 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0537245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGTG ACGACGACGG CCTCGAACGG CAGGTCGAGA AGCTGAAGCG GATCAATGCG
GCCCTCGTCG AGCGGCTGGA TCGCGCGGAT GCCTCGCGCG GCTCGCACTG GATGCTGTTC
CAGACCGCGA CCGTGCTCGA GCAGGAGCTG CTGGCGCGCA ACCGCGATCT GGAACAGGCG
CTCGCCCATC TGGAATCGGT GAACCGCGAA CTGGCCCTCG CGCGCGAGAC GGCGGACGAG
GCGAACCGCT CGAAGAGCCG TTTCCTGCGC GCTGCAAGCC ACGATCTGCT GCAACCCCTG
AGTGCCGCCA AGCTCTTCCT GTCGCATCTG TCCGAGACGG TGAACGAACC GCTGCAGGCC
GATCTGGTCT CGCGGATCGG CACGGCCTTC GATTCGACCG AAGAGCTGAT CCGCGCGCTG
CTCGAGATCT CGCGGCTCGA TTCCGTCAGG CTCGACATCT CGACCGAGCG GGTCTCGCTG
GGCCGGCTCT TCCAGCGGCT GATGGTGGAT TTCCACGGCG ACGCCGCAGC CCGCGGGCTG
GAACTGCGCT TCGTCAACTC CTCGGCCACG GTCATGTCGA ACCCGGTCTT CCTGCGCCGG
ATCGCCCAGA ACCTCGTCTC GAACGCGATC AAATACACGC GGACGGGCCG GGTGCTCGTC
GGCGCCCGGC GCGAGGGGGC GGATGTCTGG CTCGAGGTGC ATGACACGGG CCCCGGCATC
GCGCCCGAGG ACCGCGAGCG GATCTTCAAC GAATTCGAGC GGCTGGCGCC CGAAGGCGAG
GAACCGGGCA CGGGCCTCGG CCTCTCCATC GTGCGGCGCG CCTGCCTGCG GCTCGGCCAC
GAGGTCGCGC TGGACAGCGC ACCGGGGCGC GGCTCGGTCT TCCGCATCCG GCTGCCGCGC
GCGCTCGAGG CGCCGGGGGC GATCGAGGCG GGACCGGCCT CGGCGGCCAC CACCGGCGCG
GTCCAGCGTC TGGCCGGAGC GTCGCCCGAA CGGATGCTGA TGGCCGATCC GGTTGCGGCG
GGCCCTGCGG CCGCGCCCCT CGTGGGTCGG CGGGTACTGG TGGTCGAGAA CGATGCGGCG
ATGCGCGACG CCTATGCGCT CCTCCTCCGG CGCTGGGGGA TGCTGGTCGC CACGGCCGAT
GGCACTCAAG CGGCGCTCGA CAGGCTCGGG AGCTTCCTGC CCGAGCTTCT GGTGACCGAC
TATAGGCTCG ACCGCGGGGA GACCGGCCTT CAGACCATCG CGGCGCTGCG CCGCCGTCTG
GGTCCGCGCC TGCCCGCGCT GATCGTGACG GCCGAGCCCG CCGCCCAGCT CGAAGCACAG
GCCGACCGGC TGGAGGCCGC GCTGCTGCGC AAGCCGGTGT CCGAGAGCGC GCTGCGCGAG
CGGCTCGCGG CGCTTCTGGA GGGCCGCCGC CGGGGAGCGG CCGCCGCGGA ATGA
|
|---|
| Protein sequence | MLRDDDGLER QVEKLKRINA ALVERLDRAD ASRGSHWMLF QTATVLEQEL LARNRDLEQA
LAHLESVNRE LALARETADE ANRSKSRFLR AASHDLLQPL SAAKLFLSHL SETVNEPLQA
DLVSRIGTAF DSTEELIRAL LEISRLDSVR LDISTERVSL GRLFQRLMVD FHGDAAARGL
ELRFVNSSAT VMSNPVFLRR IAQNLVSNAI KYTRTGRVLV GARREGADVW LEVHDTGPGI
APEDRERIFN EFERLAPEGE EPGTGLGLSI VRRACLRLGH EVALDSAPGR GSVFRIRLPR
ALEAPGAIEA GPASAATTGA VQRLAGASPE RMLMADPVAA GPAAAPLVGR RVLVVENDAA
MRDAYALLLR RWGMLVATAD GTQAALDRLG SFLPELLVTD YRLDRGETGL QTIAALRRRL
GPRLPALIVT AEPAAQLEAQ ADRLEAALLR KPVSESALRE RLAALLEGRR RGAAAAE
|
|---|
| |