Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1236 |
Symbol | |
ID | 4896110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1284755 |
End bp | 1286557 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640111822 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001043118 |
Protein GI | 126462004 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.278366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGC TGAAGACGGG TCTCGTAGCG ACCCTATTGC TCTCGTCTGC GCCGGTCTTT GCCAACGACT CGGTCCTCAA GGCGACCGAC GATCCGAAGC AGTGGGCGAT CCAGACCGGC GACTATGCCA ACACCCGCTA TTCCGAGCTG AACCAGATCA CCCGCGAGAA CGTGGGCAAG CTTCAGGTCG CCTGGACCTT TTCGACCGGC GTGCTGCGCG GCCACGAGGG CTCGCCCCTC GTCGTGGACG GCATCATGTA TGTCCACACG CCCTTCCCGA ACAACGTCTA TGCGCTCGAT CTGGCCAATG ACGGCAAGAT CCTGTGGCGC TACGAGCCGC AGCAGAACCC CGACGTCATC GGCGTGATGT GCTGCGACAC GGTCAACCGC GGCGTGGCCT ATGCCGATGG CATGATCTTC CTGCATCAGG CCGATACGAC CGTCGTGGCC CTCGACGCGA AGAGCGGCGA GGTGAAATGG ACCGTGCAGA ACGGCGACCC GGCCAAGGGC GAGACCAACA CCGCGACCGT GCTTCCGGTC AAGGACAAGC TCCTCGTCGG CATCTCGGGC GGCGAGTTCG GCGTGCGCGG CCATGTCACC GCCTATGACA TGAAGACGGG CAAGCAGGTC TGGCGCGCCT ATTCCACCGG CCCGGACGCC GAGATGCTGG TCGATCCGGA AAACACCATG GTGCTCGGCA AGCCCGTGGG CGCCGACAGC TCGATCAAAA GCTGGGAAGG CGACCAGTGG CAGATCGGCG GCGGCACCAC CTGGGGCTGG TATTCCTACG ACCCGGACCT GAACCTCGTC TATTACGGCA CCGGCAACCC CTCGACCTGG AACCCGTCGC AGCGTCCGGG CGACAACAAG TGGTCCATGA CCATCATGGC GCGCGATGCC GATACCGGCA TGGCCAAGTG GATGTATCAG AAGACCCCGC ACGACGAGTG GGACTATGAC GGGGTGAACG AGAACATCCT CGTCGATCAG GAGATCGACG GGCAGATGCG CAAGCTGCTG GTGAACCTCG ACCGGAACGG CTTCGGCTAC ACGCTCGACC GCGAGACGGG CGAGCTTCTG GTGGCGAAGA AATACGACCC GGCGGTGAAC TGGGCGACCG AAGTGGTGAT GGACAAGGAG TCCGACCAGT ACGGCCGTCC GCAGGTGGTG GCGGAATATT CGACGGCGCA GAACGGCGAA GACACCAACA CCACCGGCGT CTGCCCGGCC GCGCTCGGCT CCAAGGACCA GCAGCCCGCC TCCTTCTCGC CCAAGACCGG CCTCGTCTAT GTGCCGACGA ACCACGTCTG CATGGACTAC GAGCCCTACC GGGTCAGCTA CTCGGCCGGC CAGCCCTATG TCGGCGCCAC CCTCTCGATG TATCCGGCGC CGAACAGCCA TGGCGGCATG GGCAATTTCA TCGCCTGGGA CGCGACGAAG GGCGAGATCA AATGGTCGCT GCCCGAGCAG TTCTCGGTCT GGTCGGGGGC TCTGGCCACC GCGGGTGACG TGGTGTTCTA CGGCACGCTC GAAGGCTATC TGAAGGCCGT CGATGCGGAG ACGGGCGAGC TGCTCTATCG CTTCAAGACC CCGTCCGGCG TCATCGGCAA CGTGATGACC TACGAGTTCA ACGGCAAGCA GTATGTGGGC GTGCTCTCGG GCGTCGGCGG CTGGGCGGGC ATCGGCCTCG CCGCGGGCCT GACCAACCCG AACGAGGGTC TGGGCGCCGT GGGCGGCTAT GCCGCGCTGT CGGACTACAC CCAGCTCGGC GGTCAGCTCA CCGTCTTTGC CCTGCCGGAC TGA
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Protein sequence | MKMLKTGLVA TLLLSSAPVF ANDSVLKATD DPKQWAIQTG DYANTRYSEL NQITRENVGK LQVAWTFSTG VLRGHEGSPL VVDGIMYVHT PFPNNVYALD LANDGKILWR YEPQQNPDVI GVMCCDTVNR GVAYADGMIF LHQADTTVVA LDAKSGEVKW TVQNGDPAKG ETNTATVLPV KDKLLVGISG GEFGVRGHVT AYDMKTGKQV WRAYSTGPDA EMLVDPENTM VLGKPVGADS SIKSWEGDQW QIGGGTTWGW YSYDPDLNLV YYGTGNPSTW NPSQRPGDNK WSMTIMARDA DTGMAKWMYQ KTPHDEWDYD GVNENILVDQ EIDGQMRKLL VNLDRNGFGY TLDRETGELL VAKKYDPAVN WATEVVMDKE SDQYGRPQVV AEYSTAQNGE DTNTTGVCPA ALGSKDQQPA SFSPKTGLVY VPTNHVCMDY EPYRVSYSAG QPYVGATLSM YPAPNSHGGM GNFIAWDATK GEIKWSLPEQ FSVWSGALAT AGDVVFYGTL EGYLKAVDAE TGELLYRFKT PSGVIGNVMT YEFNGKQYVG VLSGVGGWAG IGLAAGLTNP NEGLGAVGGY AALSDYTQLG GQLTVFALPD
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