| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1227 |
|---|
| Symbol | |
|---|
| ID | 4896026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 1275969 |
|---|
| End bp | 1277183 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640111813 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001043109 |
|---|
| Protein GI | 126461995 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.894975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CAGTTCTGGG TGGGGACGGG TTTGTCGGCT GGCCGACGGC GCTCCACCTG
TCGGACCTCG GACACGAGAT CCATATCGTC GACAACCTGT CCCGGCGCTG GATCGATACC
GAGCTGGGCG TGCAGTCCCT GACCCCGATG GACTCGATCC AGGAGCGGTG CCGGATCTGG
CATCAGGAGA CCGGCCAGCG GCTGCATTTC CACCTGCTCG ACCTGTGCGA ATACGACCGC
ATCCGCGCCT GGCTCGCCGA ATACCGCCCC GAGGCCATCA TCCACTTCGC CGAGCAGCGC
GCCGCGCCCT ATTCGATGAA GTCGGACCGC CACAAGGTCT ACACCGTCAA CAACAACGTC
AATGCGACCC ACAACCTGTT GGCCGCCATG GTCGAGACCG GCATCGACGC CCATCTCGTC
CATCTCGGCA CCATGGGGGT CTATGGCTAC TCGACAGTTG GCGCGCCGAT CCCCGAGGGC
TATCTCGACG TCTCGGTCGA GACCCCGGCG GGCCCGAAAG AGCTCGAGAT CCTCTATCCG
ACGCGGCCGG GCTCGGTCTA TCACATGACC AAGAGCCTCG ATCAGATCCT CTTCCAGTAT
TATGCCCAGA ACGACGGGCT GCGGATCACC GACCTGCATC AGGGCATCGT CTGGGGCACG
CACACGAACC AGACCCGCCG CCATCCGCAG CTCATCAACC GCTTCGACTA TGACGGCGAC
TACGGCACCG TGCTGAACCG CTTTCTGATC CAGTCGGCAA TCGGCTATCC GCTGACCGTT
CACGGCACCG GAGGGCAGAC CCGCGCCTTC ATCCATATCC AGGATTCGGT GCGCTGCGTG
GAGCTTGCGC TGTCGGATGC GCCCAAGGCG GGCGAACGGG TGAAGATCTT CAACCAGATG
ACAGAGACGC ACCGCGTGCG CGATCTGGCC GAACTGGTGG CGAAGATGAC CGGCGCCAAG
GTCTCGTTCC TGCCCAACCC GCGCAAGGAG GCCGACGAGA ACGAGCTCGT GGTCAGGAAC
GACCAGTTCC TCGCGCTGGG GCTGAAGCCC ATCACGCTGC AGGAAGGGCT GCTGGGCGAG
GTGGTCGATG TGGCGAAGAA GTTCGCCCAC CGGATCGACC GCAGCCGCGT GCCCTGCGTC
TCGGCCTGGA CGAAGGACAT CGCGCAGCGG GTCGAGCACG ATCCCGAGGG GCGGCGGCTG
CGCTCGGTGT CCTGA
|
|---|
| Protein sequence | MRIAVLGGDG FVGWPTALHL SDLGHEIHIV DNLSRRWIDT ELGVQSLTPM DSIQERCRIW
HQETGQRLHF HLLDLCEYDR IRAWLAEYRP EAIIHFAEQR AAPYSMKSDR HKVYTVNNNV
NATHNLLAAM VETGIDAHLV HLGTMGVYGY STVGAPIPEG YLDVSVETPA GPKELEILYP
TRPGSVYHMT KSLDQILFQY YAQNDGLRIT DLHQGIVWGT HTNQTRRHPQ LINRFDYDGD
YGTVLNRFLI QSAIGYPLTV HGTGGQTRAF IHIQDSVRCV ELALSDAPKA GERVKIFNQM
TETHRVRDLA ELVAKMTGAK VSFLPNPRKE ADENELVVRN DQFLALGLKP ITLQEGLLGE
VVDVAKKFAH RIDRSRVPCV SAWTKDIAQR VEHDPEGRRL RSVS
|
|---|
| |