Gene Rsph17029_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1217 
Symbol 
ID4896011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1263980 
End bp1264900 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content73% 
IMG OID640111803 
ProductHPr kinase 
Protein accessionYP_001043099 
Protein GI126461985 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0169089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.100415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCC TCCAGTCGCT CCGCCCCGCA CTGCGCACCG CCTACGGCTT GGCCGTCCGG 
TCGGATATCG ACCTGCCCGA GCTCGAGCCC CTGCCGGGCG ACGGGGCTGC GGATCTGACC
GTGCGCCGCG GCGCGCTTCC GGAGCTGCCG GGCGAGGGCG GCTTTCGCAC GCGCTTCGCG
CCCGAGCGGG CCGAGCTCTG GTGGCAGACG GTCGGCACCT TCCGTGTCGA GCCCGGCCTC
GTGACGGCAA GCCCCCATAC GGGCGTCTCC GAGGATCTGG TGGCCTATCC GCTTCTGGGC
TCGGTGCTGG CGCTGGCGCT GGAGCAGCTC GGCCTCTTCA CGATCCATGC GAGCGCCGTC
TCGGTCGGCG GCCATGGCGT GGTGATGATG GGCGACAAGG GCGCGGGCAA ATCCACCACC
GCCACGGCGA TGATCCGGGC GGGCCATCCG CTGATTGCCG ACGATATCGT GGCGGTGGAC
GAGGGGCTCT GGCTGCGCCC CGGCTTCCCG CAGGTGAAGC TCTCGCCCGC GGCGGCGGCG
GCCTTCGACG CGCCCGATGC GGTCCACCGC CCGACGGTGC CCGAGGTGCC CGAGAAATGC
CGCGTCCTGC TGCCCGAGCG GTTCGCCCGC GGCGCCACGC CGCTCAAGCG GATCTACCGG
CTCGAACGCG CGCCGGCCGG AACCGAACCT GCGGTGATCC CGGTGTCGCC GATCGAGGCG
CTGCCGCTTG CGTTGCGCTT CGCTTATGTC ACCCGCTTCG GTGCCGAGGC GCTGAACGGA
GCCGCCGGCG CCCGGCATCT GCGGCAGGCC GCGGCAATCG CGGCGAGCGG CGTCCTGCAC
CGGGTGATCG TGCCCCATGC GCTCGACCGG CTGCCCGAGG TGGTGGCGCT GATCGAACGC
GACGCCGGAG CCGCAGCATG A
 
Protein sequence
MSALQSLRPA LRTAYGLAVR SDIDLPELEP LPGDGAADLT VRRGALPELP GEGGFRTRFA 
PERAELWWQT VGTFRVEPGL VTASPHTGVS EDLVAYPLLG SVLALALEQL GLFTIHASAV
SVGGHGVVMM GDKGAGKSTT ATAMIRAGHP LIADDIVAVD EGLWLRPGFP QVKLSPAAAA
AFDAPDAVHR PTVPEVPEKC RVLLPERFAR GATPLKRIYR LERAPAGTEP AVIPVSPIEA
LPLALRFAYV TRFGAEALNG AAGARHLRQA AAIAASGVLH RVIVPHALDR LPEVVALIER
DAGAAA