| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1207 |
|---|
| Symbol | |
|---|
| ID | 4895886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1253531 |
|---|
| End bp | 1254763 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640111793 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_001043089 |
|---|
| Protein GI | 126461975 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.150349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCC TGCGCCGTCA CCTCCTTCCC CTGTTCGTCG TGGCGCTCCT GCCCGGCGTT
GCTCTGGCCG ACAGCTACAC GATCAGCGAA AGCGACCTGC TCCGCCTGCG GGTGCTGGAA
TGGCAGCCCG TCGACGGCAC CATGCGCGAG TGGGAGGCGA TGACGGGGGA ATATCGCGTC
AATGCCGACG GCACGATCTC CGTCCCGTTT CTCGGTCCGG TCGAGGCCGC AGGCCACACG
CCCGCCCAGC TCGGCACGCT GATCGCCGAC GGGCTGATGG AGCGCCTGGC GCTGCCGGAC
ATGCCCGACG CGACCATCGA GATCGCCGAA TACCGCCCCA TCATCGTCGC GGGCCATGTG
CGCGAGCCGG GCGAGGTCGT CTTCCGCCCG GGTCTGACCG CACGGCAGGC CATCGCCATG
GCGGGCGGGC CCAGCGACGA GATCCGCAGC ACGCCCGCCC TCGTGCGCGA CCTGATCTCC
GAGGAGGGGG CGCTGCGCAT CCTGCTCGAC AGCCGCGAGG GGATGATGGC CCGGCGCGCC
CGGCTTCTGG CCGAGCGGGA CAACCAGACC GAGCTCGGCC CGGTGCCCGA ACTCGACACG
GCGCGGGGCC GCGCGCTCCT GGCCGAAGAG AAGTCCTTCA TGGATCTCCG CCGCGATCAG
GTGGACCGGA ACCTCGCGGC CATCGACGCC CAGAGCGAGC TCCTGAAGGC CGAGATCGAG
GCGCTGCAGG CGAAGACCGG CCAGCTCGAG ACCCAGCGCA CGCTGGCCGA GAAAGAGACC
GCCAACGCCA AGAACCTCTC GGAGCGGGGC CTCGTCGCCA GCGGTCGCCT GTTCGAGACC
CAGCGCACCC TGTCGACGGT CGAGAGCCAG CTGCTCGACA CCTCCACCGC CATCCTGCGC
GCGCGTCAGG GCATCACCAC CGCCGAGCGC GACCGGATCG CGCTGATCGA CGGACGGTCG
TCCGAGATCG CCGCGCAGCT GCAGGAGGTC GAGGCGCAGA TCCTCGAGAT GGACCGCAAG
ATCGACACGC AGCGCAGCCT GTCGGTGTCG CTCCTGAGCC AGGCGGGCGG GAAGGATGTG
GCGGCCGATC CCTCGACCAT TGCCGCCATG AGCGATGTCG TGGTGATGCG CTTTGCGGGC
AACGAGATGC GCCAGATCCC CGACGCGATG GACGTCCGGC TCGAACCGGG CGACATGGTG
CAGATGACCC TGCGGGCGCC GTCTACGAAC TAG
|
|---|
| Protein sequence | MAALRRHLLP LFVVALLPGV ALADSYTISE SDLLRLRVLE WQPVDGTMRE WEAMTGEYRV
NADGTISVPF LGPVEAAGHT PAQLGTLIAD GLMERLALPD MPDATIEIAE YRPIIVAGHV
REPGEVVFRP GLTARQAIAM AGGPSDEIRS TPALVRDLIS EEGALRILLD SREGMMARRA
RLLAERDNQT ELGPVPELDT ARGRALLAEE KSFMDLRRDQ VDRNLAAIDA QSELLKAEIE
ALQAKTGQLE TQRTLAEKET ANAKNLSERG LVASGRLFET QRTLSTVESQ LLDTSTAILR
ARQGITTAER DRIALIDGRS SEIAAQLQEV EAQILEMDRK IDTQRSLSVS LLSQAGGKDV
AADPSTIAAM SDVVVMRFAG NEMRQIPDAM DVRLEPGDMV QMTLRAPSTN
|
|---|
| |