| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1197 |
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| Symbol | |
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| ID | 4895828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1244568 |
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| End bp | 1245362 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640111783 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001043079 |
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| Protein GI | 126461965 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0866404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAGA TGACAATGGA TCTGGGTATT CACGGTCGCC GGGCACTCGT CTGCGCCTCG
TCGAAGGGGC TGGGCCTTGG CTGCGCGGCG GCTCTGGCCG AGGCCGGTGT CGATCTGGTG
ATGAACGCGC GCGGCGCCGA GGCGCTTGAG GCGGCGGCCG AGGATCTGCG GCAGCGGTTC
GGCGCGAACG TGACCACGGT GGCGGCAGAC ATCGTCTCGG AAGAGGGGCG GGCGCGGGTG
CTCGAGGCCG CGGGCGCGGT CGACATCCTC GTGACCAACG CGGGCGGCCC CCCGCCCGGC
CTCTGGTCGG ACTGGACCCG CGACGATTTC ATCCGGGCGC TCGATGCCAA CATGCTGACG
CCCATCGCGC TGATGACCGC GCTGCTGCCG GCCATGATCG AAAGCGGCTG GGGCCGCGTC
GTCAACATCA CCTCGCAGTC GGTGCGCGCC CCGATCCCGG CGCTTGGCCT GTCGAATTCG
GCGCGGACGG GGCTCACGGG CTATGTGGCG GGCACCTCGC GGCAGGTGGC GCAGCACGGC
GTCTGCATCA ACAACCTGCT GCCGGGCATC CATGACACCG ACCGGGCCGA GGCGCTCGAC
CGCAATGCGA TGAAGGCGCA GGGCATCACG CGCGAAGAGG CCCGCGCGCA GCGGGCGGCC
AGCATCCCCA CCCGCCACTA CGGCCGGGCC GAGGATTTCG GCGCCGCCTG CGCCTTCCTC
TGCTCCGAGC ATGCGCGCTT CATCGTGGGC CAGAACCTGC TGGTCGACGG CGGCGGCACC
AACCTCACCG TCTGA
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| Protein sequence | MGEMTMDLGI HGRRALVCAS SKGLGLGCAA ALAEAGVDLV MNARGAEALE AAAEDLRQRF
GANVTTVAAD IVSEEGRARV LEAAGAVDIL VTNAGGPPPG LWSDWTRDDF IRALDANMLT
PIALMTALLP AMIESGWGRV VNITSQSVRA PIPALGLSNS ARTGLTGYVA GTSRQVAQHG
VCINNLLPGI HDTDRAEALD RNAMKAQGIT REEARAQRAA SIPTRHYGRA EDFGAACAFL
CSEHARFIVG QNLLVDGGGT NLTV
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