Gene Rsph17029_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1186 
Symbol 
ID4895781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1230399 
End bp1230809 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content63% 
IMG OID640111772 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001043068 
Protein GI126461954 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.396733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.385259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGCTGGCGAA GATGTTCAAG GCGATGATCG AGCAGGGCCA GGAGATGGCC 
CGCTCGTTCA ATCCGGCCCT TGAGCATTTC CAGGTGAAGG ACTTCGAGAA GCTCATCCCC
ACCATGCCCA AGGACGTGAT GGAGATGTGG TTCGGCAAGA CCTTCAACCG GGAGGGGCTG
GATGCCAAGA CCCGGCTTCT GGTCACGCTG GCTGCCCTTA CCGTGCTCGG CGCCCATGCC
GAGCCTCAGA TCCGGCTCAC GATCCGCCAT GCGCTGGCGG CCGGGGCCAC CAAGCGCGAG
ATCGCCGAGG TGATCTGGCA GATGAGCCTA TTCGGCGGCG TGCCCGCCAT GCAGAAGGCG
CTGGACGTGG CCCAGAGCGT CTTTGCCGAG TTCGAGGAGA CAGACGAATG A
 
Protein sequence
MSDELAKMFK AMIEQGQEMA RSFNPALEHF QVKDFEKLIP TMPKDVMEMW FGKTFNREGL 
DAKTRLLVTL AALTVLGAHA EPQIRLTIRH ALAAGATKRE IAEVIWQMSL FGGVPAMQKA
LDVAQSVFAE FEETDE