| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1180 |
|---|
| Symbol | |
|---|
| ID | 4895725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1224635 |
|---|
| End bp | 1225930 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640111766 |
|---|
| Product | NADH dehydrogenase I subunit F |
|---|
| Protein accession | YP_001043062 |
|---|
| Protein GI | 126461948 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.258408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.998026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGG ACCAGGACCG GATCTTCACC AACCTCTACG GGATGCAGGA CCGCAGCCTG
AAGGGCGCGA TGGCCCGGGG CCAATGGGAC GGGACCGCGG ACCTGCTCGC GCTCGGGCGC
GATAAGATCA TCGACATCGT GAAGGCCTCG GGTCTGCGCG GCCGCGGCGG GGCGGGCTTC
CCCACCGGCC TCAAATGGTC CTTCATGCCC AAACAGTCCG ACGGGCGCCC GGCCTATCTC
GTCATCAATG CCGACGAATC CGAGCCCGCG ACCTGCAAGG ACCGCGAGAT CATGCGCCAC
GACCCGCACA CGCTGGTCGA GGGGGCGCTG CTCGCAGGCT TCGCGATGGG GGCGGTTGCG
GCCTACATCT ACATCCGCGG CGAATATGTC CGCGAGAAGG AAGCGCTGCA GGCCGCCATC
GACGAGGCCT ATGACGCGGG CCTGATCGGC CGGAACGCGG CGAAGTCGGG CTACGATTTC
GACGTCTACC TCCACCACGG GGCGGGCGCC TACATCTGCG GCGAAGAGAC TGCGCTGCTC
GAGAGCCTCG AGGGCAAGAA GGGGATGCCG CGGATGAAGC CGCCGTTCCC GGCGGGCTCG
GGCCTCTACG GTTGCCCCAC GACGGTGAAC AACGTCGAGT CGATCGCCGT CATTCCTGCG
ATCCTGCGCC GCGGCGGCGA GTGGTTCGCC TCGTTCGGCC GGCCGAACAA CGCAGGCGTG
AAGCTCTTCG CCATGTCGGG ACACGTCAAC ACGCCCTGCG TCATCGAGGA GAGCATGTCG
ATCTCGATGA AGGAACTCAT CGAGAAGCAC GGCGGCGGCG TCCGCGGCGG CTGGAAGAAC
CTCAAGGCTG TCATTCCCGG CGGCGCCTCC TGCCCGATCA TCCCGGCCGA GCAGTGCGAG
GATGCCGTCA TGGACTATGA CGGGATGCGC GAGCTGAAAT CCTCGTTCGG CACGGCCTGC
ATGATCGTGA TGGACCAGCA GACCGACGTC ATCAAGGCGG TCTGGCGGCT GGCCAAGTTC
TTCAAGCACG AGAGCTGCGG CCAGTGCACG CCCTGCCGCG AGGGCACGGG CTGGATGATG
CGCGTGATGG ACCGGCTGGT GCGCGGCGAA GCCGAGGTCG AAGAGATCGA CATGCTGCTG
TCGGTGACGA AGCAGGTCGA GGGCCACACG ATCTGCGCGC TCGGCGATGC GGCGGCCTGG
CCGATCCAGG GCCTCATCCG GCACTATCGC GAAGAGATCG AGGACCGGAT CAAGGCCAAG
AAGACGGGGC GCATGGGCGC CATGGCGGCG GAGTGA
|
|---|
| Protein sequence | MLKDQDRIFT NLYGMQDRSL KGAMARGQWD GTADLLALGR DKIIDIVKAS GLRGRGGAGF
PTGLKWSFMP KQSDGRPAYL VINADESEPA TCKDREIMRH DPHTLVEGAL LAGFAMGAVA
AYIYIRGEYV REKEALQAAI DEAYDAGLIG RNAAKSGYDF DVYLHHGAGA YICGEETALL
ESLEGKKGMP RMKPPFPAGS GLYGCPTTVN NVESIAVIPA ILRRGGEWFA SFGRPNNAGV
KLFAMSGHVN TPCVIEESMS ISMKELIEKH GGGVRGGWKN LKAVIPGGAS CPIIPAEQCE
DAVMDYDGMR ELKSSFGTAC MIVMDQQTDV IKAVWRLAKF FKHESCGQCT PCREGTGWMM
RVMDRLVRGE AEVEEIDMLL SVTKQVEGHT ICALGDAAAW PIQGLIRHYR EEIEDRIKAK
KTGRMGAMAA E
|
|---|
| |