| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1162 |
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| Symbol | |
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| ID | 4895612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1203431 |
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| End bp | 1207087 |
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| Gene Length | 3657 bp |
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| Protein Length | 1218 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640111748 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001043044 |
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| Protein GI | 126461930 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.897146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG AGCGGAAGTT CACCACGGCG GAGGGCGGCG CCTATGGCGG CGTCGGCTTC
ACCACGACGG TGTCCGAGAT CCGGAACCCC GACGGCACCG TGGTCTTCCG CAACGAGAGC
GTCGAGGTGC CCGAGGGCTG GAGCCAGGTG GCTTCGGACG TGCTGGCCCA GAAATATTTC
CGCAAGGCGG GCGTGCCCGC CCGCCTCAAG CGCGTGAAGG AGAAGGGGGT CCCGGACTTC
CTGTGGCGCT CGGTGCCCGA CGAGGCGGAG CTGGCGAAGC TGCCCGAAGA GGAGCGGTTC
GTCGGCGAGA CCTCGGCCCG GCAGGTGTTC GACCGTCTGG CCGGCGCCTG GGCCTACTGG
GGCTGGAAGG GCGGCTATTT CTCGACCGAG GCCGATGCGC GCGCCTATTA CGACGAGATG
CGCCACATGC TGGCCCGGCA GATGGCCGCG CCGAACTCGC CGCAATGGTT CAACACCGGC
CTTCACTGGG CCTATGGCAT CGATGGCCCG TCGCAGGGCC ACTTCTATGT CGATCATGCC
ACCGGCAAGC TGCAGAAGTC GGACAGCGCC TACGAACATC CCCAGCCGCA CGCCTGCTTC
ATCCAGTCGG TGCAGGACGA CCTCGTGAAC GAGGGCGGGA TCATGGATCT CTGGGTGCGC
GAGGCCCGGC TGTTCAAATA CGGCTCGGGC ACCGGCACCA ACTTCTCGAG CCTGCGCGGC
GAGGGCGAGA AGCTCTCGGG CGGTGGCAAG TCCTCGGGCC TCATGGGGTT CCTGAAGATC
GGCGACCGGG CGGCGGGCGC GATCAAGTCG GGCGGCACCA CGCGCCGCGC GGCCAAGATG
GTGATCTGCG ACATGGATCA CCCCGACATC GAGCAGTTCA TCAACTGGAA AGTCATCGAG
GAACAGAAGG TCGCCTCTCT GGTCGCCGGT TCGAAGCAGC ATGAAGCGAA GCTGAACGAC
ATCTTCGCCG CCATCCGCAG CTTCGACGGC TCGATCGAGG GAGCGACCGA CCCGGCCGGA
AACGCAGGCC TCAAGACCGC GATCCGCGCC GCCAAAAAGG CCATGATCCC CGAGACCTAC
ATCAACCGCG TGCTGCAGTA TGCGCGGCAG GGCTTCTCCT CGATCGAATT CCCGACCTAC
GATACCGATT GGGATTCCGA GGCCTATACG ACCGTCTCGG GCCAGAATTC GAACAACTCG
GTCCGCGTGA CCGATGCCTT CCTGCAGGCG GTGAAGGACG ATGCCGACTG GGCGCTCGTC
CGGCGCACCG ACGGCAAGGT CGCCAAGACC ATCAAGGCGC GCGAGCTCTG GGATCAGGTG
GGCCATGCCG CCTGGGCCTG CGCCGACCCG GGCATCCAGT TCCACGACAC GGTCAACGCC
TGGCACACCT GCCCCGAGGA CGGGCAGATC CGCGGCTCGA ACCCGTGCTC GGAATACATG
TTCCTCGATG ACACGGCCTG CAATCTCGCC TCGATGAACC TGCTCACCTT CTTCGAGGCG
GGCCGCTTCG ATGCCGAGGG CTATGTCCAC GCCACGCGGC TCTGGACGGT CACGCTCGAG
ATCTCGGTGA TGATGGCGCA GTTCCCCTCG AAGGAGATCG CGCAGCTTTC CTACGACTTC
CGCACGCTGG GTCTGGGCTA CGCCAACATC GGCGGGCTGC TGATGAACAT GGGGCTGGGC
TACGATTCCT GCGAGGGCCG GGCGCTCTGC GGCGCGCTCT CGGCGATCAT GACCGGCGTG
TCCTATGCCA CCTCGGCCGA GATGGCGGGC GAGCTCGGCG CCTTCTCGGG CTACGAGCGC
AATGCGGCCC ACATGCTGCG CGTCATCCGC AACCACCGCA CCGCCGCCCA CGGCCACACG
ACCGGCTACG AGGGCGTCAA CGTGAGCCCC GTCGCGCTCG ATCAGGTGAA CTGCCCCGAT
CCGCGGCTCG TGGCGCTGGC CAAATCCTCC TGGGACGAGG CGCTGCGGCT CGGCGAGGCG
CATGGCTACC GCAACGCGCA GGTGACGGTG ATCGCGCCCA CGGGCACCAT CGGCCTCGTG
ATGGACTGCG ACACCACCGG CATCGAGCCC GACTTCGCGC TGGTGAAGTT CAAGAAGCTC
GCGGGCGGCG GCTACTTCAA GATCATCAAC CGCTCGGTGC CCGCGGCGCT CGAGACGCTG
GGCTACGCTT CGGCGCAGAT CTCGCAGATC GTGGCCTATG CGGTGGGCCA CGGCACGCTC
GCCAACTGCC CGACGATCAG CCATTCGGCG CTGGTGGGCC ATGGCTTCGG CGCCCGCGAG
ATCGAGAAGA TCGAGGCCGC GCTGCCCTCG GCCTTCGACA TCCGCTTCGT CTTCAACCAG
TGGACGCTGG GCGAGGATTT CTGCAAGGGC GCGCTCGGCA TCCCGGCCGA CAAGCTCGCC
GACCCGACGT TCGACCTGCT GCGCCATCTG GGCTTCACGC GGGCGCAGAT CGAGGCCGCC
AACGACCATG TGTGCGGGAC CATGACGCTC GAGGGCGCGC CGCATCTTAA GGCCGAGCAT
CTGCCGGTGT TCGACTGCGC CAACCCCTGC GGCAAGAAGG GCAAGCGTTA CCTCTCGGTC
GAGAGCCACA TCCACATGAT GGCCGCGGCC CAGAGCTTCA TCTCGGGCGC GATCTCGAAG
ACGATCAACA TGCCGAACTC GGCCACCATC GCCGAGACGC TGGCGGCCTA CGAGCTGTCG
CACTCGCTGG GGATCAAGGC CAACGCGCTC TACCGCGACG GATCGAAACT GAGCCAGCCG
CTCGCCTCGG CGCTGGTCGA GGACGATGAG GAGGCCGAGG AGATCCTCGC CACCGGCACG
CCTCAGGAGA AGGCCATCGT GCTGGCCGAG AAGATCGTCG AGAAGGTGAT CGTCAAGGAG
ATCGTGCGCA GCCACCGCGA GAAGCTGCCC GAGCGCCGCA AGGGCTATAC GCAGAAGGCC
ATCGTCGGCG GCCACAAGGT CTATCTGCGG ACCGGCGAAT ACAAGGACGG CAGCCTCGGC
GAAATCTTCA TCGACATGCA CAAGGAAGGC GCGGGCTTCC GGGCGATGAT GAACAACTTC
GCCATCGCCG TCTCGGTGGG CCTGCAATAT GGCGTGCCGC TCGAGGAGTT CGTCGACGCC
TTCACCTTCA CCAAGTTCGA ACCCGCGGGC ATGGTGCAGG GCAACGACTC GATCAAGAAC
GCGACCTCGA TCCTCGACTA CATCTTCCGC GAGCTGGCGG TGTCCTACCT CGACCGGACC
GACCTTGCCC ATGTGAAGCC GGAAGGGGCG AGCTTCGACG ATCTGGGCGG CGGCACCGAC
GAGGGCCGGA AGTCGAACCT GACCGAAGTA TCGGAGGCGG CCGCCTCGCG CAGCCTCGAG
GTGCTCAAGC AGATCAGCTC GACGGGCTAT CTGCGCAAGC GCCTGCCGCA GGAACTGACG
GTGCTACAGG GCGGGATGGC CGTGGGCTTC GACACGGTCC CCGTGGTGGG CACCATCGGC
GAAAGCCGGA GCGTGACCGC GATTGCCTCC GGCACCGTGA CGATGGACGC GCGCACCAAG
GCCAAGATGC AGGGCTACGA GGGCGATCCC TGCGGCGAAT GCGGCAACTA CACGCTCGTC
CGCAACGGCA CCTGCATGAA GTGCAACACC TGCGGCGGCA CGAGCGGCTG CAGCTGA
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| Protein sequence | MKIERKFTTA EGGAYGGVGF TTTVSEIRNP DGTVVFRNES VEVPEGWSQV ASDVLAQKYF
RKAGVPARLK RVKEKGVPDF LWRSVPDEAE LAKLPEEERF VGETSARQVF DRLAGAWAYW
GWKGGYFSTE ADARAYYDEM RHMLARQMAA PNSPQWFNTG LHWAYGIDGP SQGHFYVDHA
TGKLQKSDSA YEHPQPHACF IQSVQDDLVN EGGIMDLWVR EARLFKYGSG TGTNFSSLRG
EGEKLSGGGK SSGLMGFLKI GDRAAGAIKS GGTTRRAAKM VICDMDHPDI EQFINWKVIE
EQKVASLVAG SKQHEAKLND IFAAIRSFDG SIEGATDPAG NAGLKTAIRA AKKAMIPETY
INRVLQYARQ GFSSIEFPTY DTDWDSEAYT TVSGQNSNNS VRVTDAFLQA VKDDADWALV
RRTDGKVAKT IKARELWDQV GHAAWACADP GIQFHDTVNA WHTCPEDGQI RGSNPCSEYM
FLDDTACNLA SMNLLTFFEA GRFDAEGYVH ATRLWTVTLE ISVMMAQFPS KEIAQLSYDF
RTLGLGYANI GGLLMNMGLG YDSCEGRALC GALSAIMTGV SYATSAEMAG ELGAFSGYER
NAAHMLRVIR NHRTAAHGHT TGYEGVNVSP VALDQVNCPD PRLVALAKSS WDEALRLGEA
HGYRNAQVTV IAPTGTIGLV MDCDTTGIEP DFALVKFKKL AGGGYFKIIN RSVPAALETL
GYASAQISQI VAYAVGHGTL ANCPTISHSA LVGHGFGARE IEKIEAALPS AFDIRFVFNQ
WTLGEDFCKG ALGIPADKLA DPTFDLLRHL GFTRAQIEAA NDHVCGTMTL EGAPHLKAEH
LPVFDCANPC GKKGKRYLSV ESHIHMMAAA QSFISGAISK TINMPNSATI AETLAAYELS
HSLGIKANAL YRDGSKLSQP LASALVEDDE EAEEILATGT PQEKAIVLAE KIVEKVIVKE
IVRSHREKLP ERRKGYTQKA IVGGHKVYLR TGEYKDGSLG EIFIDMHKEG AGFRAMMNNF
AIAVSVGLQY GVPLEEFVDA FTFTKFEPAG MVQGNDSIKN ATSILDYIFR ELAVSYLDRT
DLAHVKPEGA SFDDLGGGTD EGRKSNLTEV SEAAASRSLE VLKQISSTGY LRKRLPQELT
VLQGGMAVGF DTVPVVGTIG ESRSVTAIAS GTVTMDARTK AKMQGYEGDP CGECGNYTLV
RNGTCMKCNT CGGTSGCS
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