Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1148 |
Symbol | |
ID | 4895465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1189895 |
End bp | 1191286 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640111734 |
Product | pyruvate dehydrogenase subunit beta |
Protein accession | YP_001043030 |
Protein GI | 126461916 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.236454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACCC AGGTTCTGAT GCCCGCCCTG TCGCCGACGA TGGAGGAAGG CACGCTCGCC AAATGGCTGG TGAAGGAAGG CGATGCGGTC AAGTCCGGCC AGATCATCGC CGAGATCGAG ACCGACAAGG CCACGATGGA ATTCGAGGCC GTCGATGAGG GCACGGTGGG CAAGCTGCTC GTGGCCGAGG GCACGGCCGG CGTGAAGGTG AACACGCCCA TCGCCGTGCT GGTCGAGGAG GGGGAGAGCG CCGACGAGGT GCAGGCTCCC GTGCCGACCC AGAAGGAGAA GCAGCCCGAG CCCGCCGAAG CCTCGGAAGG CAAGGCCGTG GACGAGCCGC TCGTCTCCTC GCCGGGCGCC CCGGTGCCGG GCAAGCGCGA CCGCTCGCCC GACTGGCCGG ACGGCACCCA GATGAAGACC ATGACGGTGC GCGAGGCGCT CCGCGAGGCG ATGGCGGAAG AGATGCGCGG CGACGAGCAT GTCTTCCTGA TGGGCGAGGA AGTGGGCGAG TATCAGGGCG CCTACAAGAT CAGCCAGGGC CTTCTGGACG AGTTCGGCGA CCGGCGCGTG GTCGACACGC CGATCACCGA GCATGGATTC GCCGGCATTG CGGTGGGCGC AGCCTTCGGC GGGCTTCGCC CCATCGTCGA GTTCATGACC TTCAACTTCG CCATGCAGGC GATCGACCAG ATCATCAACT CGGCCGCCAA GACGCTCTAC ATGTCGGGCG GCCAGATGGG CTGCCCCATC GTGTTCCGCG GCCCGAACGG CGCCGCCGCC CGCGTGGGCG CCCAGCACAG CCAGGATTAT GCGGCATGGT ATGCGCAGAT CCCGGGCCTC AGGGTGGTGA TGCCCTATTC GGCGGCGGAT GCGAAAGGTC TTCTGAAGAC CGCGATCCGC GACCCGAACC CGGTGATCTT CCTCGAGAAC GAGATCCTCT ACGGCCGGTC CTTCGAGGTG CCGCTGATGG ACGATTTCAC GATCCCCTTC GGCAAGGCCC GGATCTGGCG CGAAGGAACG GATGTCACCA TCGTCTCCTT CGGCATCGGC ATGACCTATG CGCTGGAAGC TGCCGACAAG CTCGCCGCCG AGGGCATCTC GGCCGAGGTG ATCGACCTGC GCACGCTGCG CCCCATCGAT TACGAGACGG TGATCGAGTC GGTGAAGAAG ACCAACCGCT GCATCACCGT CGAGGAGGGC TGGCCGGTGG GCTCCATCGG CAACCATCTC GCCGCGACGA TCATGCAGCA GGCCTTCGAC TGGCTGGATG CGCCGGTGCT GAACCTGACG GGCAAGGACG TGCCGATGCC CTATGCCGCC AATCTCGAGA AGCACGCGCT CGTGACCACG GCCGAGGTGG TCGAGGCCGC GAAATCCGTC TGCTACCGCT GA
|
Protein sequence | MATQVLMPAL SPTMEEGTLA KWLVKEGDAV KSGQIIAEIE TDKATMEFEA VDEGTVGKLL VAEGTAGVKV NTPIAVLVEE GESADEVQAP VPTQKEKQPE PAEASEGKAV DEPLVSSPGA PVPGKRDRSP DWPDGTQMKT MTVREALREA MAEEMRGDEH VFLMGEEVGE YQGAYKISQG LLDEFGDRRV VDTPITEHGF AGIAVGAAFG GLRPIVEFMT FNFAMQAIDQ IINSAAKTLY MSGGQMGCPI VFRGPNGAAA RVGAQHSQDY AAWYAQIPGL RVVMPYSAAD AKGLLKTAIR DPNPVIFLEN EILYGRSFEV PLMDDFTIPF GKARIWREGT DVTIVSFGIG MTYALEAADK LAAEGISAEV IDLRTLRPID YETVIESVKK TNRCITVEEG WPVGSIGNHL AATIMQQAFD WLDAPVLNLT GKDVPMPYAA NLEKHALVTT AEVVEAAKSV CYR
|
| |