| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1144 |
|---|
| Symbol | |
|---|
| ID | 4895429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1183350 |
|---|
| End bp | 1187240 |
|---|
| Gene Length | 3891 bp |
|---|
| Protein Length | 1296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640111730 |
|---|
| Product | putative phage host specificity protein |
|---|
| Protein accession | YP_001043026 |
|---|
| Protein GI | 126461912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.383644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGC TTCTGCTGGC CGCGGCCGGA TCGGCGATCG GAGCAGGCTT CAGCGGCACG
GTGCTCGGGC TGACAGGGGC GGTCATCGGG CGCGCGATCG GGGCGACGGT CGGCCAGCTG
ATCGACCAGC GGCTGATGGG CGCGGGATCG CAGACGGTCC GCACCGGGCG GATCGAACGT
TTCCGTCTGA TGGGCGCCGG CGAGGGCGCC CCCGTGGCCC AGCTGTTCGG TCGCAATCGG
GTGGCAGGAC AGGTGATCTG GGCCTCGCGC TTCCTCGAGA GCCAGTCCGA GAGCACGGGC
GGCGGAAAGG GCGGCGGCCC GAGATCGACA GTCGTGAGCT ATTCCTATTC CGTCAGCCTC
GCCGTCGCGC TGTGCGAGGG TGAGATCCTG CGCGTGGGCC GCATCTGGGC CGATGGTGCC
GAGATCGCGA CGGGGTCGCT CAACCTTCGG CTCTATCGCG GGACGGAAGC TCAGCTGCCG
GATCCCAAGA TCGAGGCAGT GGAGGGGGCG GGCATGGCGC CGGCCTACCG CGGGATCGCT
TATGTGGTGA TCGAGGATCT CGACCTCGCC CGGTTCGGCA ACCGGGTGCC GCAATTCTCG
TTCGAGGTGA TGCGGGCAGC GCAGGGGGCT CTGGCGGATC GGGTGATGAC CCTTCAGCGC
GCGGTGAAGG GCGTGGCGCT GATCCCGGGC ACGGGAGAAT ACGCTCTGGC CACGAGCCGT
CTCGCCTACA GCCCCGATCC GGGAGAGACC GAGGCCGCCA ACGTGCACAC GGCGTCTGGG
GAAAGCGACA TGCGCAGCTC GCTTGCGCAG TTGAAGGGCG AGCTCCCGGC CTGCCGGTCG
GTGTCGCTGG TCGTGTCCTG GTTCGGGAGC GACCTGCGCT GCGGCGCCTG CGAGATCCGC
CCCAAGGTCG AGGGGCATCT CGACGCGGCG ACCATGGCCT GGCGGTCGGG CGGGATCGAC
CGCACGCAGG CCGAACGGGT GGCGCGGATC GACGACCGTC CGATCTATGG GGGAACGCCT
GCGGATGCGG CGGTGGTCGA GGCGATCCAC GCCCTGAAGG CGCAGAACTG CTCGGTGCTC
TACTATCCGT TCATCCTCAT GGAACAGCTT CCCGGTAATG ATCTGCCGGA CCCCTGGTCA
GGTGCTGCGG GCCAGCCGGT GCTGCCCTGG CGCGGGAGGA TCACACTCTC GACAGCGCCG
GGTCAGCCGG AGACGCCTGA CAGGACGGGA GCCGCCGAGG ATGAGGTGCG CGCCTTCTTC
GGCGACGCGG ACCCTCGCCA GTTCCGCATC GAGGACGGGC GCGTGATCCA TGACGGCGCC
GACGACTGGC GCTACCGGCG CTTCATCCTC CACGCGGCCT GGCTCTGCCG GCTGGCCGGC
GGGGTGGAGG CCTTCTGCGT GGGCTCCGAG TTGCGCGGAC TGACGGCGAT CCGGGGGGCG
GACGACAGCT TCCCGGCGGT GGCCGAACTG CAGAGGCTTG CGGCCGACGT GCGCGGCATC
CTCGGGCCCG ACGTGAAGAT CGGTTACGCC GCCGACTGGA GCGAATGGTC CAGCCTCCAT
GCCGATGGCA ATCTCTACTT CCATCTCGAT CCGCTCTGGT CGGATCCGAA CATCGATTTC
ATCGGCATCG ACAATTACAT GCCGCTCTCG GACTGGCGCG AGGCCGAGAC TCATGCGGAC
GCGCGGTGGC CCTCGGTGCA GGATCTGGGC TACCTCAAGT CGAACATCGC CGGAGGCGAG
GGTTTCGCGT GGTATTATCC CGACGAGGCC GCGGCGGCGG CTCAGGACCG GCGGCCGATC
ACGGATGCGG ATTTCGGAGA GCCCTGGGTG CATCGCCCCA AGGACCTCCG AACCTGGTGG
TCGCTGCCCC ATCACGAGCG CATCGGCGGG GTGCGGCTGG CGCAGCCGAC CGGCTGGGTC
CCGCGCTCGA AGCCGATCTG GTTCACCGAA TATGGGTGTC CGGCGCTCGA CCTCGGGAGC
AATCAGCCGA ACCTGTTCAT CGATCCCAAA AGCTCGGAAT CCGCGCTGCC GCGGGGCTCG
TCCGGACGAC GCGACGACGG GATCGCGATG AACTACCTGC GCGCGATGGC CGAATACTGG
CAGGACGAGG CCAACAATCC GGTGTCGGAC CTCTATGGTG GCTCCATGGT CGACATGGAC
CGCGCCCATG CCTGGGCCTG GGACGCCCGT CCATTTCCGG CCTTTCCCGC GCTCGGCGAT
GTCTGGTCCG ACGGGTCGAA CTATGCGCGC GGTCATTGGC TGAACGGTCG CGCAGCCTCG
CAACCGCTGT CCGCCGTCGT GGCCGAGTTC TGCGAACGGT CCGGGGTGAC CGCCATCGAC
GTCACGCAGT TGCAGGGCGT GGTGCGCGGC TATGGGATTT CCGAGGTGGA CAGTGCGCGG
GCGGCCTTGC AGCCGCTGAT GCTGGCCTAT GGCTTCGAGG CGCTGGAGCG CGAGGGCAAG
CTGATCTTCC GCATGCGCGA CGGACGCGCG AAGGCCACGG TCTCGCGCGA GGACCTGGTG
GCCTCGGACG ATCTCGAGGG CGCGCTCGAG CGCGTGCGCG CGGCGGAGGT CGAGACCGCA
GGCCGGGTTC GGCTGCACTT TCTCGAGGCG GAAGGCGATT ATGAGGCACG TCAGGTCGAG
GCGGCCTTCC CGGACGAAGC GACCTTTGCC GTCTCGCAAT CCGAAGTGCC GCTCGTGCTC
ACCTCGGGCG AGGCGCGGGG CGCCGTCGAG CGGTGGCTGG CCGAGGCCCG CGTGGCGCGC
GACAGCCTGC GCCTGGCCCT GCCGCGGTCG GCTCTGGCCT TCGGTGCCGG CGACGTTCTG
GAGATTGAAG GCCGGCGCTA TCGCATCGAC CGCCTCGATC AGGCCGAATG CCAGCTGGCG
GAGGCGGTTC GTGTGGAACC CGGCATCTAC CGCCCCGCCG ATATGGCCGA AGAGCAGGTG
CGCGCGCGTC GCATTGCGGC TTCCGGTCCG GTCCGGCCGA TCTTTCTCGA TCTGCCCCTG
CTCACGGGAA CGGAGCTGCC CCATTCCCCC CACTTCGGTG TGGCAGCAAC GCCTTGGCCG
GGGCAGGTTG CGGTCTGGAG CGCGACGCAG GATGCGGGCT ATCGCCTGAA CCGGCTTCTG
GGCGTGGCCG CAACGGCGGG CATCACCGAG ACGATCCTGC GGGCTGCACC GATGGGGCGA
TGGGACATGG GCGCGCCGCT CCGGGTGCGG CTGCAGGGGC CGCCGCTCGC CGCGGCTTCG
GATCTCGAGG TGCTGAACGG AGCCAACCTC ATGGCCATCG GCGACGGCCG ACCCGACGGG
TGGGAGCTCT TCCAGTTCGC GGACGCGCGG CTGGTTTCGC CGCGGGTCTG GGAGCTTTCG
CGGAGGCTCC GGGGGCAGGC GGGAACGGAC GGGCAGATGC CCGAGATCTG GCCCGAGGGC
AGCACGGTCG TTCTCGTCAA CGGCGCGCTG ACGCAGCTTC AGATGCCGCT GGCCGACCGC
GGGCTCGCCC GGCATTACAG GATCGGTGCC GCTTCTCGCG GTTACGACGA TCCGGACACC
GTCCACCGGA CCGAGGCTTT CGCGGGGGTC GGGCTCCGGC CCTATGCGCC GGTCCATCTG
GCGGTGGAGC GGGACGGAGA GCACATCCTG CTGCGCTGGA TCCGTCGCAC CCGGATCGAC
GGCGACAGCT GGGAGGGGCG CGAGGTACCG CTGGGAGAGG AGAGCGAGCT TTATCTGGTC
CGCGTGGTGG CGGGGGGGAA GGTGCGCCGG CAGGAGGAGG TGCGGGAGCC CCGCTGGACA
TACACCGGGG CCGCGCAGGC GGCGGATGGC GTGGGAAGCG CCTTCTTCCT CGAAGTCGCC
CAGGTGTCGG AGAGCTTCGG GCCCGGGCCG TTCCGGCGCA TCGCGCTCTG A
|
|---|
| Protein sequence | MATLLLAAAG SAIGAGFSGT VLGLTGAVIG RAIGATVGQL IDQRLMGAGS QTVRTGRIER
FRLMGAGEGA PVAQLFGRNR VAGQVIWASR FLESQSESTG GGKGGGPRST VVSYSYSVSL
AVALCEGEIL RVGRIWADGA EIATGSLNLR LYRGTEAQLP DPKIEAVEGA GMAPAYRGIA
YVVIEDLDLA RFGNRVPQFS FEVMRAAQGA LADRVMTLQR AVKGVALIPG TGEYALATSR
LAYSPDPGET EAANVHTASG ESDMRSSLAQ LKGELPACRS VSLVVSWFGS DLRCGACEIR
PKVEGHLDAA TMAWRSGGID RTQAERVARI DDRPIYGGTP ADAAVVEAIH ALKAQNCSVL
YYPFILMEQL PGNDLPDPWS GAAGQPVLPW RGRITLSTAP GQPETPDRTG AAEDEVRAFF
GDADPRQFRI EDGRVIHDGA DDWRYRRFIL HAAWLCRLAG GVEAFCVGSE LRGLTAIRGA
DDSFPAVAEL QRLAADVRGI LGPDVKIGYA ADWSEWSSLH ADGNLYFHLD PLWSDPNIDF
IGIDNYMPLS DWREAETHAD ARWPSVQDLG YLKSNIAGGE GFAWYYPDEA AAAAQDRRPI
TDADFGEPWV HRPKDLRTWW SLPHHERIGG VRLAQPTGWV PRSKPIWFTE YGCPALDLGS
NQPNLFIDPK SSESALPRGS SGRRDDGIAM NYLRAMAEYW QDEANNPVSD LYGGSMVDMD
RAHAWAWDAR PFPAFPALGD VWSDGSNYAR GHWLNGRAAS QPLSAVVAEF CERSGVTAID
VTQLQGVVRG YGISEVDSAR AALQPLMLAY GFEALEREGK LIFRMRDGRA KATVSREDLV
ASDDLEGALE RVRAAEVETA GRVRLHFLEA EGDYEARQVE AAFPDEATFA VSQSEVPLVL
TSGEARGAVE RWLAEARVAR DSLRLALPRS ALAFGAGDVL EIEGRRYRID RLDQAECQLA
EAVRVEPGIY RPADMAEEQV RARRIAASGP VRPIFLDLPL LTGTELPHSP HFGVAATPWP
GQVAVWSATQ DAGYRLNRLL GVAATAGITE TILRAAPMGR WDMGAPLRVR LQGPPLAAAS
DLEVLNGANL MAIGDGRPDG WELFQFADAR LVSPRVWELS RRLRGQAGTD GQMPEIWPEG
STVVLVNGAL TQLQMPLADR GLARHYRIGA ASRGYDDPDT VHRTEAFAGV GLRPYAPVHL
AVERDGEHIL LRWIRRTRID GDSWEGREVP LGEESELYLV RVVAGGKVRR QEEVREPRWT
YTGAAQAADG VGSAFFLEVA QVSESFGPGP FRRIAL
|
|---|
| |