| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1143 |
|---|
| Symbol | |
|---|
| ID | 4895447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1182910 |
|---|
| End bp | 1183350 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640111729 |
|---|
| Product | NlpC/P60 family phage cell wall peptidase |
|---|
| Protein accession | YP_001043025 |
|---|
| Protein GI | 126461911 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | [TIGR02219] putative phage cell wall peptidase, NlpC/P60 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0669271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.758995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGGG CCGATGTGGT GGCCGAGGCA CGGTCCTGGC TGGGCACGCC CTACGTCCAC
CAGGCTTCGG CCAGGGGGGC CGGCGCGGAC TGCCTCGGCC TTCTGAGGGG CATCTGGCGG
TCGTTGATCG GCCCGGAGCC GCTGAAAGTG CCTGCCTATA CGCCGGACTG GTCGGAGCCT
TCCGGCCATG AAGAGCTGAT GGCGGCCTGC GACCGGTGCC TTGTCCGCAA GCCGCTTGGG
GCTGCGGCGG AGGGAGACGT CCTGCTCTTC CGAATGCGGC CGGGCGCGGT CGCCAAACAT
CTCGGCATTC TGGTTCGTCC GGGCCCGAAT GCCTCGTTCA TCCACGCCTA TGGCGGCCAC
GGCACCGTCG AAAGCCCGCT CTCCGAGCCC TGGGCCGAGC GGATCGCGGC CCGTTATGCA
TTTCCGGAAA GGACGGACTG A
|
|---|
| Protein sequence | MNGADVVAEA RSWLGTPYVH QASARGAGAD CLGLLRGIWR SLIGPEPLKV PAYTPDWSEP
SGHEELMAAC DRCLVRKPLG AAAEGDVLLF RMRPGAVAKH LGILVRPGPN ASFIHAYGGH
GTVESPLSEP WAERIAARYA FPERTD
|
|---|
| |