Gene Rsph17029_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1140 
Symbol 
ID4895384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1180737 
End bp1181387 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content70% 
IMG OID640111726 
Productputative phage tail minor protein 
Protein accessionYP_001043022 
Protein GI126461908 
COG category[S] Function unknown 
COG ID[COG5281] Phage-related minor tail protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.594391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA TCGAGTCTCT GGAAGAGCAG GTGGCGGCGC TCGAGAGCAC GCTTGGCAGT 
GCGGCCGGGA TGACGGCGAG CTTCGAAAAC GAACTGACGC GGATGCGGGA CGCAATGGTC
TTCACGAACC GCGAGGTGGA TCGACTGTCG AGCGGCATGG GGACGGGCCT CAGGCGCGCC
TTCGACGGGG TGCTGTTCGA CGGCATGAAG CTCTCGGACG CGATGCAGGG TCTCGCGCAA
TCGATCTCCC GCACCGTCTA TTCGGTGGCG ATGAAGCCGG TGCAGGATGC GGTGTCGGGC
TTTCTGGCCG ATGGCCTGAA CTCGATCCTC GGCGGGCTGA TGCCCTTCGC GAAGGGGGGC
GCCTTCTCGC AGGGAAGGGT CATGCCTTTC GCGCGTGGCG GTGTGGTGGC AGGGGCGACG
CCTTTTGCCA TGCGGGGGGC CACCGGGCTG ATGGGCGAGG CGGGCCCCGA AGCGATCCTG
CCGCTCGCCC GCGGGGCAGA CGGGAGGCTC GGCGTGCAGG CGGGCGGCGG CCGCGCGGTG
CAGGTGGTGA TGAACGTGGC CACGCCCGAT GTGCAGGGCT TCGAGCGCAG CCGGGGCCAG
ATCGCGGCGC AGGTGAGCCG GATGCTCGCG CGCGGCCAGC GCAACGGGTA G
 
Protein sequence
MADIESLEEQ VAALESTLGS AAGMTASFEN ELTRMRDAMV FTNREVDRLS SGMGTGLRRA 
FDGVLFDGMK LSDAMQGLAQ SISRTVYSVA MKPVQDAVSG FLADGLNSIL GGLMPFAKGG
AFSQGRVMPF ARGGVVAGAT PFAMRGATGL MGEAGPEAIL PLARGADGRL GVQAGGGRAV
QVVMNVATPD VQGFERSRGQ IAAQVSRMLA RGQRNG