| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1126 |
|---|
| Symbol | |
|---|
| ID | 4895245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1170794 |
|---|
| End bp | 1172056 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640111712 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
|---|
| Protein accession | YP_001043008 |
|---|
| Protein GI | 126461894 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.550857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.314195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAG TGGTTGTCAC GGGGCTGGGC ATGGTCACGC CGCTGGCGTG CGGCGTCGAG
GAGACCTGGA AGCGGCTGCT GGCCGGGCAG TCCGGCGCGG GTCCGATCCA GCGGTTCGAC
ACGTCCAACG TGACCACGCA ATATGCCTGC GAGATCCCGG TGGGCGACGG CAGCGACGGC
ACCTTCAACG CCGACGAATG GATGGAGCCC AAGGACCGGC GCAAGGTCGA CGATTTCATC
CTCTATGCCA TGGCCGCGGC CACGCAGGCG GTGAAGGATT CCGGCTGGGA GCCGCAGTCC
GAGGAAGACC GCTGCCGCAC GGGCGTGATG ATCGGCTCGG GCATCGGCGG CCTCTCGGCC
ATCGCCGACA CGGCCGTGCT CATCAAGGAA AAGGGGCCGA AGCGCGTCTC GCCCTTCTTC
ATCCCCTCGG CGCTCATCAA CCTCGCTTCG GGGCAGGTCT CGATCCGCTT CGGCTACAAG
GGGCCGAACC ATGCCGTCGT CACCGCCTGC TCGACCGGCG CCCATGCGAT CGGCGATGCG
GCGCGGCTGA TCCAGCTCGG CGATGCCGAC GTGATGCTCG CGGGCGGCGC CGAGAGCCCG
ATCTCCGAGA TCGGCATCGC GGGCTTCAAC GCCTGCAAGG CGCTCTCGAC CAAGCGGGGC
AACGAGCCCG AGGCCGCCTC GCGGCCCTGG GACGCCGACC GCGACGGATT CGTGATGGGC
GAGGGCGCGG GCGTCGTCGT GCTCGAGGAA TATGAACATG CCAGGGCGCG CGGCGCCAAG
ATCTATGCCG AGGTGCTGGG CTACGGTCTT TCCGGCGATG CCTACCACAT CACCGCCCCC
TCGGAAGACG GGGACGGCGG CTTCCGCTCG ATGACCATGG CGCTGAAGCG CGCGGGCCTC
GAACCCTCGG CGGTCGATTA CATCAACGCC CACGGCACCT CGACCATGGC CGACGTGATC
GAGCTCGGCG CCGTCGAGCG GCTTCTGGGC GAGGCGGCGT CCGCGGCCAC CATGTCCTCG
ACCAAGTCGA GCATCGGGCA CCTCCTTGGC GCGGCGGGCG CGGTCGAGGC GATCTTCTGC
GTGCTGGCGA TCCGCGATCA GGTGGCGCCG CCCACGCTGA ACCTCGACAA CCCGGCCGTG
GAGGCGAGGA TCGACCTTGC GCCCAAGGCG GCGCACCCGC GCAAGATCGA CGTGGCCTTG
TCGAATTCCT TCGGCTTCGG CGGCACGAAC GCGTCGCTGG TGCTGGGACG GGTCACCTCG
TGA
|
|---|
| Protein sequence | MRRVVVTGLG MVTPLACGVE ETWKRLLAGQ SGAGPIQRFD TSNVTTQYAC EIPVGDGSDG
TFNADEWMEP KDRRKVDDFI LYAMAAATQA VKDSGWEPQS EEDRCRTGVM IGSGIGGLSA
IADTAVLIKE KGPKRVSPFF IPSALINLAS GQVSIRFGYK GPNHAVVTAC STGAHAIGDA
ARLIQLGDAD VMLAGGAESP ISEIGIAGFN ACKALSTKRG NEPEAASRPW DADRDGFVMG
EGAGVVVLEE YEHARARGAK IYAEVLGYGL SGDAYHITAP SEDGDGGFRS MTMALKRAGL
EPSAVDYINA HGTSTMADVI ELGAVERLLG EAASAATMSS TKSSIGHLLG AAGAVEAIFC
VLAIRDQVAP PTLNLDNPAV EARIDLAPKA AHPRKIDVAL SNSFGFGGTN ASLVLGRVTS
|
|---|
| |