Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1114 |
Symbol | |
ID | 4895160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1156936 |
End bp | 1158753 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640111700 |
Product | 4-alpha-glucanotransferase |
Protein accession | YP_001042996 |
Protein GI | 126461882 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1640] 4-alpha-glucanotransferase |
TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.587609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGA CCATCGAAGA CAGGGCGGCC GAGTTCGCCA TCCAGCCCAG CTATCACGCG CTCGGCGGCG AATTCGTCCG CGCGCCGGTC GAGACGCTGC GCGAAATGCT CGGCGCCTTC GGCATCTCGC TGGACGGACC GCCGCCCGAC CGGGCGCCGC CCGAGATGCG GGCGCCCGAG GGCTACCGCT GCTTCCTGCC CGAGGGCGAG ATGCGCCGCT GGGGCATCGC CGCGCAACTC TACCAGCTGC GGTCCGAGCG CAACTGGGGC ATCGGCGACT TCGCCGATCT CTGCGATCTG GCGCGGATCG GAGGCGCCGC GGGGGCCGAT TTCATCGGCC TGAACCCGCT CCACGCCCTG TTTCTGGCCA ATCCTGCCCA CACCAGCCCC TTCTCGCCCT CGAACCGGCG CTTCCTGAAC CCGCTCTATA TCGCGGTCGA CCGCGTGCCG GGCTACAGGC CCGAGTTCGC GCCCGAGGGG CTGGATCAGC TCCGCGCGCC GGATCTCGTG GATTATCCGG CGGTGGCCGC AGCCAAGCTC GGCGCGCTGC GCCGTCTGTG GCGCGAGGGG CCGGACGATG CGATGGGCTT CATGCGCTTC TGCGCCGAGG GTGGCGAGCT TCTGCGGCGC CACGCGCTCT TCGAGGCGAT CTCGGGCCAG ATGGTGGCGG ACGGCTACGG CGCGGGCTGG CTCGGCTGGC CGGTGGAGTT CCACGACGCC GAAGGCCAGG CCGTCATCGA CTTCGCCGAC GCACGGGGCG ACGAGGTGGG CTTCCACCTC TGGCTGCAAT GGATCGCCGA TCGGCAGCTC GAAGAGGCGC GCGATGCCTG CCGCGCCGCC GGGATGAAGA TCGGGCTCTA TCTCGACTTC GCCGTGGGCG AGGTGCCGGA CGGCTCGAGC ACCTGGTCGG ACCCGAGCCT TGCCGTGCCG GGTCTCCGGA TCGGCGCCTC GCCCGACTGG TTCAACGCGC AGGGGCAGGA CTGGGGTCTG GCACCCCTCT CTCCGGTGAA GCTCGCCGAT CTGCGAGCCG CGCCCTTCGG GGCGCTGATG CAGGATGCCA CGCGCCGCGC CGGCGCGCTG CGGATCGACC ATGCGATGGG CGTCTGGCAG CTGTTCCTCA TCCCCGACGG GATGGGCGCC CCGCAGGGCA CCTATGTGCG CTATCCGATC GAGGACATGC TGCGCGCGCT GGCCGAAGCC TCGTGCCGCA ACCGCACCAT CGTGATCGGC GAAGACTTGG GCAACGTGCC AGACGGCTTC CGCGAGCTGA TGGCGCGGAT GAACATCCTT TCCTACCGCA TCCTGCTCTT CGAGCGGCAC GACCACGGCT ATATCGCGCC CGAGCATTAT CCGCGCGAGG CGCTCGTCTG CCTGTCCACC CACGACCTGC CCACCTTCCG CGGCTGGTGG CGGGGCGACG ATGTGGCGAT CCGGCGCGAC TTCCACCTGA TCTCGGACGA GGCCGCCCGC CAGCAGGGCG ACTTCCGCTG GACCGAGCGG CGCCAGCTGC TCGAGGATCT GGCGCGGGCG GGGCTGATGG GCTGGGACGA GATCGACCGG ATCGGCCCCG ACGATCCGCC CGAGGCGCTG GTCGTGGCGG TGCACCGCCA TCTCGCCCGC GCGCCCTCGC GCCTCTTCGC GGTCCGGATC GAGGACATGG CGGGCGAGGT GGCCCCGGTG AACGTGCCCT CGACCGTGGA CGAACATCCC AACTGGCGGC GCAGGCTCGG CGTGCCGCTG GAGGCTCTGG GCGAGACCGC ACTGTTCCGC GGCATCGCCG GAGCCCTTGA AGCCGAGCGA CCAAGGGAGC CCTCATGA
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Protein sequence | MSRTIEDRAA EFAIQPSYHA LGGEFVRAPV ETLREMLGAF GISLDGPPPD RAPPEMRAPE GYRCFLPEGE MRRWGIAAQL YQLRSERNWG IGDFADLCDL ARIGGAAGAD FIGLNPLHAL FLANPAHTSP FSPSNRRFLN PLYIAVDRVP GYRPEFAPEG LDQLRAPDLV DYPAVAAAKL GALRRLWREG PDDAMGFMRF CAEGGELLRR HALFEAISGQ MVADGYGAGW LGWPVEFHDA EGQAVIDFAD ARGDEVGFHL WLQWIADRQL EEARDACRAA GMKIGLYLDF AVGEVPDGSS TWSDPSLAVP GLRIGASPDW FNAQGQDWGL APLSPVKLAD LRAAPFGALM QDATRRAGAL RIDHAMGVWQ LFLIPDGMGA PQGTYVRYPI EDMLRALAEA SCRNRTIVIG EDLGNVPDGF RELMARMNIL SYRILLFERH DHGYIAPEHY PREALVCLST HDLPTFRGWW RGDDVAIRRD FHLISDEAAR QQGDFRWTER RQLLEDLARA GLMGWDEIDR IGPDDPPEAL VVAVHRHLAR APSRLFAVRI EDMAGEVAPV NVPSTVDEHP NWRRRLGVPL EALGETALFR GIAGALEAER PREPS
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