Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1111 |
Symbol | |
ID | 4895154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1150915 |
End bp | 1153101 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640111697 |
Product | glycogen branching enzyme |
Protein accession | YP_001042993 |
Protein GI | 126461879 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.827586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.454122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTGA CATCGAAGCC CGGGGAGCTC GTCCCCGAAA GCGACGTGGC CGCCATCATG CGCGGAACGC ACGGAGATCC CTTCCGCGTG CTGGGCATGC ACGGAGGCGG CGGCGCGCCG CTCTCCGTCC GGGTCTTCGC CCCGCAGGCC GCGGAGGTTG CGGTGCTGGG GCAGGGGGGC AAGGTGCTCG CCTCTCTCGA ACGCATCGGC GCCGAGGGCT TCTTCGCCGG CACGGTGCCG GGCGAGGAGA AATTCCCCTA CCGCCTCCGC TTCGTCTCGG GGCCGCACGA GTGGGAGGCG GACGATCCCT ACCGCTTCCC CGAGGTGCTG GGCGAGCTCG ACGAATATCT TCTGGGCGAG GGGCGGCACT ATCAGCTTTA TACCCGGCTC GGCGCGCATC CGGCCGAGAT CGAGGGCGTG CAAGGCGTGA GCTTCGCCGT ATGGGCGCCG AACGCCCGCC GCGTCTCGGT CGTGGGCGCC TTCAACGCCT GGGACGGCCG CCGCCACCCG ATGCGCAAGC GCATCGGCGT GGGCGTGTGG GAGCTGTTCG TTCCCGGCCT TCATACAGGC GATCTCTACA AATACGAGAT CCTCGGGCCT TCGGGCGAGC GGTTGCCGCT CAAGTCCGAC CCGCTCTCCT TTGCGCAAGA GGCGCCGCCG GCCACGGCTT CGGTGGTCCA TGGGCTGCCC GAGGCCGAGT GGCACGATGC GGGCTGGATG CAGGAGCGCG AGAGCCGCCA GCGCCGCGAC GCGCCGATCT CGATCTACGA GGTCCATGCG GGCTCGTGGC GGCAGGGGCT CGATTACGAC GCGCTGGCCG AGGAACTGTC GGCCTATGTG CGCGAGATGG GCTTCACCCA TGTGGAGTTC CTGCCGATCA GCGAACATCC CTTCACCGGC TCTTGGGGCT ATCAGCCCAT CGGCCTCTTC GCCCCCACCG CGCGCTTCGG CCCGCCCGAG GGCTTCGCGC GGCTGGTGGA CCGGCTCCAC CGCGACGGGA TCGGCGTCAT CCTCGACTGG GTGCCGGCGC ACTTCCCGTC GGACGCTCAT GGGCTGGCCA ATTTCGACGG GACCCATCTC TATGACCATG CCGACCCGCG GCAGGGCTTC CACCGCGACT GGAACACCCA GATCTACAAC TTCGGCCGGC AGGAGGTGGC GAACTTCCTG CAGGCCTCGG CGCTCTTCTG GCTCGACCGC TACCATGTCG ATGCGCTGCG CGTGGATGCG GTGGCCTCGA TGCTCTACCT CGACTATTCG CGGAACGCCG GCGAATGGGT GCCGAACCGC CACGGCGGGC GCGAGAATCT CGAGGCGATC GATTTCCTGC GCGGCGTGAA CGAGCGCGTC CGGCTCGACC ATCCGGGCTG CATCACCATC GCCGAGGAAT CGACGGCCTT CCCGCAGGTG AGCCGCCCGG TCGAGGACGG CGGGCTTGGC TTCGGCTTCA AGTGGAACAT GGGCTGGATG CACGACACGC TGGGCTATTT CCGGCGCGAC CCGATCCACC GCAAGCACCA CCAGAACGAC CTGACCTTCG GCATGGTCTA TGCCTATTCC GAGGATTTCG TCCTGCCCCT CAGCCATGAC GAGGTGGTGC ACGGCAAGGG CTCGCTCATC GGGCAGATGG CGGGCGACCG CTGGCAGAAG TTCGCGAACC TTAGGGCCTA TTTCGGCTTC ATGTGGGCCC ATCCGGGCAA GAAGCTCCTC TTCATGGGCG GCGAGTTCGC GCAGGAGCGC GAGTGGAACC ACGATGCCTC GCTCGACTGG CACCTGCTCG ACGATCCGTC CCACGCCGGG ATGAAGCGCC TCGTGGCCGA CCTGAACCGC GAATATCGCA AGCGCCCCGC GCTGCACCGG ATGGATTGCG ATCCCGAAGG TTTCGAGTGG ATCGACGCCG GCGACAGCGA GAACAGCGTG CTGAGCTTCC TGCGCAAGGC GCCCGGCGAA AAGCCGGTGC TGGCGGTCTG CAACCTCACG CCGGTGGTGC GGTCGGATTA CCGGATCGGG GTGCCCGAGG GCGGCGAGTG GCGCGAGATC CTCAACTCCG ACGCCGCGAT CTACGGCGGC TCGGATGTGG GCAATCCCGG CGGGCTTCAG GCCGAGGAAG TCAGCTGGCA CGGACGTCCG GCCTCGCTGC GCCTGACGCT GCCGCCGCTT GCGACGATCT TCGTGACGCC TGCATGA
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Protein sequence | MNVTSKPGEL VPESDVAAIM RGTHGDPFRV LGMHGGGGAP LSVRVFAPQA AEVAVLGQGG KVLASLERIG AEGFFAGTVP GEEKFPYRLR FVSGPHEWEA DDPYRFPEVL GELDEYLLGE GRHYQLYTRL GAHPAEIEGV QGVSFAVWAP NARRVSVVGA FNAWDGRRHP MRKRIGVGVW ELFVPGLHTG DLYKYEILGP SGERLPLKSD PLSFAQEAPP ATASVVHGLP EAEWHDAGWM QERESRQRRD APISIYEVHA GSWRQGLDYD ALAEELSAYV REMGFTHVEF LPISEHPFTG SWGYQPIGLF APTARFGPPE GFARLVDRLH RDGIGVILDW VPAHFPSDAH GLANFDGTHL YDHADPRQGF HRDWNTQIYN FGRQEVANFL QASALFWLDR YHVDALRVDA VASMLYLDYS RNAGEWVPNR HGGRENLEAI DFLRGVNERV RLDHPGCITI AEESTAFPQV SRPVEDGGLG FGFKWNMGWM HDTLGYFRRD PIHRKHHQND LTFGMVYAYS EDFVLPLSHD EVVHGKGSLI GQMAGDRWQK FANLRAYFGF MWAHPGKKLL FMGGEFAQER EWNHDASLDW HLLDDPSHAG MKRLVADLNR EYRKRPALHR MDCDPEGFEW IDAGDSENSV LSFLRKAPGE KPVLAVCNLT PVVRSDYRIG VPEGGEWREI LNSDAAIYGG SDVGNPGGLQ AEEVSWHGRP ASLRLTLPPL ATIFVTPA
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