| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1109 |
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| Symbol | |
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| ID | 4895151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1145466 |
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| End bp | 1147613 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640111695 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001042991 |
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| Protein GI | 126461877 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.573693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGCGACC GGTTGAGTTC GCACACTCGA CCAAGATGGG GATCAGGCGT GACGGACAGG
AATGGCGAGA GCGGCCGCAT GCGGCCCGCC CGCGCATTGC GCGCTCCGAA AGGACCGGAC
TCAGAGGCGA ACCGGCAGGG CGTGGCAGCA GCGACAGGAG CGCAGGACAG GCGCGACGGG
GGCGAGGAGG CGCTGATGCG GCTGGCCGAG GCCCGCGTCG CCATCGAGGG CGTCAATCTG
GAGATCGACG GCGGGCGCTT TGCGGCGAAG GTGGTGGCCG GTTGGGAGGT GGCGGTCGAG
GCCGACATCT TCTGCGACGG GCATGACAGC ATCGACGCGG CCGTGCTGCA CCGTCAGCGG
GGTACCGATG ACTGGACCGA GGTCCGCATG GAGTTCCTCG TGAACGACCG CTGGCAAGCG
CGCGTCACCT TCGCCGAGAA CGCCTTCCAC GAGCTGACCT TCCTCGCCTG GCGCGATCTC
TACACCACCT GGCGCAATGA GGTGGCGAAG AAGCTGGCCG CGGGCCAGAA GATCGATCTC
GAACTGGAGG AGGGGCGCAG GCTTCTGCAA TCGGTCGAGA CCGCCGGAGC GGAGGATCGC
GCTCTCGTCG ACCGCATTCT CGGAGAGGAC GGGGCGGATC AGGAGGCCGG CGTCCGCTTC
GCGCGGATGA GTTCTCCCGA GGCGGTGGCG GCGATGAAAC GCTGTGCGCC GCGCACCAAT
CTCACCTGCT ACAAGATCCT GCCGATCTTC GCCGACCGCG AGGCCGCGGC CTTCTCGGCC
TGGTACGAGA TGATGCCGCG GTCGCAGTCG GGCGATCCGG AGCGGCACGG CACCTTCGAC
GATGTGATCC GCAAACTGCC CTATGTGCGG GATCTGGGTT TCGATGTGCT CTATTTCACG
CCGATCCACC CGATCGGGCG CGTGAACCGG AAGGGGCGCA ACAACAGTCT GACGCCTGGG
CCGGACGATC CGGGTTCTCC TTATGCCATC GGCAGCGAGG AGGGCGGGCA CGATGCGATC
CATCCCGAGC TCGGCGATTT CGAGAGCTTC GGCCGGCTGG TCGAGGCCGC CCATGTCCAT
GGGCTCGAGA TCGCGCTCGA TTTCGCGATC CAGTGCGCGC CGGATCACCC CTGGATCCGC
GAGCATCCGG AATGGTTCGA CTGGCGGCCC GACGGCACGA TCAAGTTCGC CGAGAACCCT
CCGAAGAAAT ACGAGGACAT CGTCAACGTC CATTTCTACC GCGGCGCCCT GCCGGAACTG
TGGTATGCGC TTCGCGACGT GGTGCTGTTC TGGGTGGAAA AGGGCGTGAA GATCTTCCGG
GTGGACAATC CCCACACGAA GCCCTTCCCG TTCTGGGAAT GGATGATCGG TGAGGTGCAA
TCGCAGCATC CCGACGTGAT CTTCCTCGCC GAGGCCTTCA CGCGCCCCAA GGTGATGAAG
CGTCTGGGCA AGGTGGGCTA CGGCCAGAGC TATTCCTACT TCACCTGGCG CAACACCAAG
GCCGAGCTCA TCGAATACCT CACCGAGCTC ACAACCGAGG AATGCCGGCA CTACATGCGG
CCGAACTTCT TTGCCAATAC GCCCGACATC AATCCGGTCT ATCTCCAGCA TTCGGGGCGG
GCGGGATTCC GGGTGCGGCT CGCGCTGGCC GCGACGCTCG GGGGCAACTA CGGGCTCTAC
AACGGCTATG AGATCTGCGA GGCGACCCCG GTGCCGGGGA AGGAGGAGTA TTTCAATTCC
GAGAAATACC AGCTCCGCGC CTGGGACTTC GACCAGCCGG GCCATATCCA GGATGACATC
CGGCTGATGA ACCACATCCG CCGCACCCAT CCTGCGATGC GCGATTTCAC CCGGTTGCGC
TTCTACGATG CGCACAACGA CTCCGTGCTG GCTTACGGCA AGAGCACCGA GGACAAGCAG
GATTTCCTGC TCTTCCACGT CAATCTCGAT CCGCACGCGG CCCAGACCTT CGAATTCGAG
GTCCCGCTGT GGGAGTTCGG GCTGCCCGAC GATGCCTCGG TCGAGGTCGA GGATCTGCTC
AACGGAAATC GCTTCACCTG GCACGGAAAG TGGCAGTGGC TTGAACTCGA CCCGCAGACC
CGCCCCTATG CGGTCTGGCG GCTCTACGCG CCGGGAATGC CCAGATGA
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| Protein sequence | MCDRLSSHTR PRWGSGVTDR NGESGRMRPA RALRAPKGPD SEANRQGVAA ATGAQDRRDG
GEEALMRLAE ARVAIEGVNL EIDGGRFAAK VVAGWEVAVE ADIFCDGHDS IDAAVLHRQR
GTDDWTEVRM EFLVNDRWQA RVTFAENAFH ELTFLAWRDL YTTWRNEVAK KLAAGQKIDL
ELEEGRRLLQ SVETAGAEDR ALVDRILGED GADQEAGVRF ARMSSPEAVA AMKRCAPRTN
LTCYKILPIF ADREAAAFSA WYEMMPRSQS GDPERHGTFD DVIRKLPYVR DLGFDVLYFT
PIHPIGRVNR KGRNNSLTPG PDDPGSPYAI GSEEGGHDAI HPELGDFESF GRLVEAAHVH
GLEIALDFAI QCAPDHPWIR EHPEWFDWRP DGTIKFAENP PKKYEDIVNV HFYRGALPEL
WYALRDVVLF WVEKGVKIFR VDNPHTKPFP FWEWMIGEVQ SQHPDVIFLA EAFTRPKVMK
RLGKVGYGQS YSYFTWRNTK AELIEYLTEL TTEECRHYMR PNFFANTPDI NPVYLQHSGR
AGFRVRLALA ATLGGNYGLY NGYEICEATP VPGKEEYFNS EKYQLRAWDF DQPGHIQDDI
RLMNHIRRTH PAMRDFTRLR FYDAHNDSVL AYGKSTEDKQ DFLLFHVNLD PHAAQTFEFE
VPLWEFGLPD DASVEVEDLL NGNRFTWHGK WQWLELDPQT RPYAVWRLYA PGMPR
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