| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1075 |
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| Symbol | |
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| ID | 4897641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1108484 |
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| End bp | 1110304 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640111662 |
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| Product | pepF/M3 family oligoendopeptidase |
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| Protein accession | YP_001042958 |
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| Protein GI | 126461844 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.371255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC CCCTCCCCCG CCCGGTCTTC GACGCCAACG CCAGTGCCGG GGGCCTCGGG
AACCTGCCCG ACTGGGATCT GCGCGACCTC TATCCCACCC CGGACGGTCC GGAATTCCGC
GACGACATGG CCTGGCTCAA GGAGGCCTGC GCAGGCTTCG CCGCCAGCTA CGAGGGCAAG
CTTGCGAGCC TCGATGCGGC GGGCCTTCTC GCCTGCATCG AAGCCTACGA GAAGATCGAC
ATCGTGGCCG GGCGGCTCAT GTCCTACGCC GGCCTGCGCT ATTACCAGAA CACGATGGAC
AGCGAGCGCG CCAAGTTCAT GGCCGATGCG CAGGACAAGG TGACCGACTC CACGACCGCG
CTCGTCTTCT TCAGCCTCGA GTTCAACCGG CTGGAGGATG CCCATCTCGA AGCCCGTCTG
GCCGAAAGCG CGGCGCTCGC GCGCTACAAG CCCGTCTTCG ACCGGATGCG CGCCATGCGC
CCGCACCAGC TTTCGGACGA GCTGGAACGC TTCCTCCATG ACGAATCGAC CGTCGGCGCC
GCCGCCTGGA ACCGGCTCTT CGACGAGACG ATGGCGGGGC TCACCTTCAC GCTCGAGGGC
GAGGAGCTGA ACCTCGAATC CACCCTGAAC CTGCTGACCG ACCCCGAGCG CCCGCGCCGC
GAGGCCGCCG CCCGCGCTCT GGCGGAGGTC TTCGGCCGCA ACATCAAGCT CTTCGCGCGA
GTGCACAACA CGCTCGCGAA AGAGAAGGAG ATCCACGACC GCTGGCGCAA GATGCCCACG
CCGCAATATG GCCGGCACCT CGCGAACCAT GTCGAGCCCG AGGTGGTCGA GGCGCTGCGC
AATGCGGTGG TCGCGGCCTA TCCCAAGCTC TCGCACCGCT ACTACCGGCT GAAGGCCAAG
TGGCTGGGCC TCGAGAAGCT GCAGGTCTGG GACCGCAACG CCCCGCTGCC CACCGAGACG
CCGCGGCTCG TCGGCTGGGA CGAGGCGCAG TCGACGGTGA TGGAGGCCTA TTCGGCCTTC
GATCCGCGGA TGGCAGAGAT CGCGAAACCC TTCTTCGAAA AGGGCTGGAT CGATGCGGGC
GTGAAGCCCG GCAAGGCGCC CGGGGCCTTC GCTCATCCGA CCGTGACGAC CGTCCACCCC
TATGTGATGC TGAACTATCT CGGCAAACCG CGCGACGTGA TGACCCTCGC GCATGAGCTC
GGCCACGGCG TCCATCAGGT GCTGGCGGCG GGACAGGGGG AACTCCTCTC CTCGACGCCG
CTCACGCTGG CCGAGACGGC GAGCGTCTTC GGCGAGATGC TGACCTTCCG CAAGCTCCTC
GATGCGGCGC GGACCCCGGC CGAGCGGAAG ACGCTGCTGG CCGGCAAGGT CGAGGACATG
ATCAACACGG TCGTGCGCCA GATCGCCTTC TACGATTTCG AATGCAAGCT GCACGAGGCG
CGCCGGCAGG GCGAGCTCAC CCCCGAGGAC ATCAACGCCC TGTGGATGAG CGTGCAGGCC
GAAAGCCTCG GCGATGCGTT CGAGTTCATG GAAGGATACG AGACCTTCTG GTCCTACGTT
CCGCATTTCG TCCATTCGCC CTTCTACGTC TATGCCTATG CTTTCGGCGA CGGGCTGGTG
AATGCGCTCT ATGCCGTCTA TGCCGAGGGC ACTCCGGGCT TTCAGGACAA ATATTTCGAG
ATGCTCTCGG CGGGCGGCTC CAAGCATCAC AAAGAGCTTC TCGCCCCCTT CGGCCTCGAT
GCGAGCGACC CGACCTTCTG GGACAAGGGG TTGAGCATGA TCGCAGGCTT CATCGACGAG
CTCGAAGCCA TGGACGATTG A
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| Protein sequence | MTLPLPRPVF DANASAGGLG NLPDWDLRDL YPTPDGPEFR DDMAWLKEAC AGFAASYEGK
LASLDAAGLL ACIEAYEKID IVAGRLMSYA GLRYYQNTMD SERAKFMADA QDKVTDSTTA
LVFFSLEFNR LEDAHLEARL AESAALARYK PVFDRMRAMR PHQLSDELER FLHDESTVGA
AAWNRLFDET MAGLTFTLEG EELNLESTLN LLTDPERPRR EAAARALAEV FGRNIKLFAR
VHNTLAKEKE IHDRWRKMPT PQYGRHLANH VEPEVVEALR NAVVAAYPKL SHRYYRLKAK
WLGLEKLQVW DRNAPLPTET PRLVGWDEAQ STVMEAYSAF DPRMAEIAKP FFEKGWIDAG
VKPGKAPGAF AHPTVTTVHP YVMLNYLGKP RDVMTLAHEL GHGVHQVLAA GQGELLSSTP
LTLAETASVF GEMLTFRKLL DAARTPAERK TLLAGKVEDM INTVVRQIAF YDFECKLHEA
RRQGELTPED INALWMSVQA ESLGDAFEFM EGYETFWSYV PHFVHSPFYV YAYAFGDGLV
NALYAVYAEG TPGFQDKYFE MLSAGGSKHH KELLAPFGLD ASDPTFWDKG LSMIAGFIDE
LEAMDD
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