| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1072 |
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| Symbol | |
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| ID | 4895888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1104948 |
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| End bp | 1105997 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640111659 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001042955 |
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| Protein GI | 126461841 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0863187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.714428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCC TTCCGCCCCA CGGGGGCAAA CTGAGCATCA CGATCGGAGA GGATCCTCCC
GACCGTCTTG ATAAGGCGCT CGTGCGCGAG GCGCCAGAGG AGGCCGCGCT GTCGCGCTCG
CGGCTGATGA AGCTGATCGG CGAGGGCGCG GTGCGGCTCG AGGGCGCTCC CGTGACGGAT
CCGAAGGCGA AGGTCGCCGA GGGGCAGGTC TACGAGATCG CGCTCGATGC GCCGGCCGAG
GTGGAGGCCC GCCCCGAGGC GATCCCGCTC TCGGTCGTCT GGGAGGACGA AGACCTCATC
GTCATCGACA AGCCGGTGGG GATGGTGGTC CATCCCGCGC CCGGTCAGTG GACGGGGACG
CTGGTCAATG CGCTTCTCCA CCATTGCGGC GAGAGCCTTT CGGGCATCGG CGGGGAGAAG
CGCCCGGGCA TCGTCCACCG GATCGACAAG GACACGTCGG GGCTTCTCGT GGTGGCGAAG
ACCGACCGGG CGCATCAGGG CCTTGCGGCG CAGTTCGAGG CGCATACGGT CGAGCGGCGC
TATCTCGCGC TGGTGCATGG CGTGCCCGAG GTCTCGGACC CGCGGCTGCG CGGCGTGCGC
GGCACGAGCT TCGAGCCGGG CGGCGTGCTG CGGATCGCCA CCGGCCTCGC CCGCCACCGC
ACCGACCGGC AGCGGCAGGC GGTCACCTTC GAGGGCGGGC GTCATGCCGT GACCCGGGCG
CGGCTGCTCG AGCGGTTCGG CACGCCGCCG GTGCTGGCGC TCGTCGAATG CCGGCTCGAG
ACGGGGCGCA CGCACCAGAT CCGCGTGCAT ATGGCCCATG CGGGCCACGG GCTGATCGGC
GACCAGACCT ATGGCGGCAG GCGCAAGCTC TCGCCGAAGG CACTGGGGCC CGAGGCCGCG
GCGGCGGCGG AAGCCTTCCC GCGGCAGGCG CTCCATGCGG CGAGCCTCGG CTTCCGCCAT
CCGGTGAGCG GCGAGGAACT GAGCTTCGAG AGCCCCTTGC CCGCGGATAT GGCGGGCCTC
CTGTCCCTCC TGCCGCGGAT GCAAGGGTAA
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| Protein sequence | MAILPPHGGK LSITIGEDPP DRLDKALVRE APEEAALSRS RLMKLIGEGA VRLEGAPVTD
PKAKVAEGQV YEIALDAPAE VEARPEAIPL SVVWEDEDLI VIDKPVGMVV HPAPGQWTGT
LVNALLHHCG ESLSGIGGEK RPGIVHRIDK DTSGLLVVAK TDRAHQGLAA QFEAHTVERR
YLALVHGVPE VSDPRLRGVR GTSFEPGGVL RIATGLARHR TDRQRQAVTF EGGRHAVTRA
RLLERFGTPP VLALVECRLE TGRTHQIRVH MAHAGHGLIG DQTYGGRRKL SPKALGPEAA
AAAEAFPRQA LHAASLGFRH PVSGEELSFE SPLPADMAGL LSLLPRMQG
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