Gene Rsph17029_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1068 
Symbol 
ID4897620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1101196 
End bp1101948 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content74% 
IMG OID640111655 
ProductABC transporter related 
Protein accessionYP_001042951 
Protein GI126461837 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.437472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TCGCGCTCGA CAATCTGACC GTGCGCCGGG GCGACTGTCC GGTGGTGGAT 
CATGTCACCT TCACGGTGGA GCCGGGCGAG GTGCTGGGCC TGATCGGGCC GAACGGGGCG
GGCAAGACCT CGCTTCTGCG CGCGGCGATG GGCCTTCTGC CCTCGGCGGG CAAGAGCAGC
CTCGCGGGCC TTGCGCCCCG GGCGCGGGCG CGGGCGGCGG CCTTCCTGCC GCAGGCGCGC
GAGATCGCCT GGCCGGTGGA TGTCGAGACG CTGGTGATGC TGGGCCGCGT TCCCCATGCC
GGGCGCCGCG TCACCGCCGC CGACCGCGAG GCGGTCACGC GCGCGCTCGA CCGGATGGGG
CTCGCGGGCT ACCGCCACCG CATCGCGACG GCCCTGTCGG GCGGGGAGCA GGCGCGGGTG
CTGATCGCGC GCACGCTGGC GCAGGAGGCG CCGCTTCTTC TTGCCGACGA GCCGGTGGCG
GGGCTCGATC CCGAGAGCCA GATCCGCACC ATGCAGGTGT TCCAGAGCCT TGCGGCGGAG
GGACGCGCGG TGGTGGCCTC GATCCACGAT CTGGGTCTTG CCGCGCGGCA CTGCACGCGG
CTTCTCCTGA TCGCGCGCGG GCGACTGGTG GCGGACGGGC CGCCCGGCGT CGTGCTGACG
GCCGCCAATC TGGCCGAGGT CTTCGGGGTG CGCGCCTATT ACGCCGACAC GCCCGACGGG
CCGGTGTTTC AGCCGCTGGG CGTCACCCGG TGA
 
Protein sequence
MSLLALDNLT VRRGDCPVVD HVTFTVEPGE VLGLIGPNGA GKTSLLRAAM GLLPSAGKSS 
LAGLAPRARA RAAAFLPQAR EIAWPVDVET LVMLGRVPHA GRRVTAADRE AVTRALDRMG
LAGYRHRIAT ALSGGEQARV LIARTLAQEA PLLLADEPVA GLDPESQIRT MQVFQSLAAE
GRAVVASIHD LGLAARHCTR LLLIARGRLV ADGPPGVVLT AANLAEVFGV RAYYADTPDG
PVFQPLGVTR