| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1065 |
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| Symbol | |
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| ID | 4895788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1097531 |
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| End bp | 1099366 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640111652 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001042948 |
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| Protein GI | 126461834 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.362217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA CAGCCGCCTC GCTCCTCACC CTCATGGCCG CAGCCCCGCT GCAGGCTCAG
GACATCGCTC TCGACGAGAT CCTCGTCTCG CCGAGTCTCG TCGCCACCGA AACCAGCCGC
ACCGGCGCCA CGGTGGATGT GGTCACCGCC GAGGACATGC AGGCCACGGG CGAGATCTCG
GTGAGCGACC TGCTCGCGCG TCTGCCGGGC GTGTCCTACA CGCGGAACGG CGGGCTCGGC
GCCACGACGA CGCTCCGCAT CCGCGGGCTG GGCAGCGCCT ATCAGGCGGT GCGGATCGAC
GGGATCGACG TGGCGGATCC GTCGGGCACG CAATCCGACT TCGACTTCGG CTCGCTCACC
GCCGGCGGCA TCGACCGGAT CGAGGTGCTG CGCGGGTCGC AATCCGCGAT CTACGGCTCG
GAAGCCGTGG CGGGCGTCAT CGACATCGCC ACCTACCGGC CGCGCGATCC GGGCGTCAGC
GGGCAGCTGT CGCTCGAGGG CGGCAGCAAC CGCACCTTCA CCGGCGGCCT CTCCACAGGC
CTTCTGACCG AGCGCGGCGA GCTGGCCTTC AGCGTGGCCC GCACCGTCTC GGACGGGATC
TCGCAGGCCG CCTCCGGCAC CGAGCGCGAC GGGTTCGACA CCACCTTCTA TGCCCTCTCC
GGTGCCTACG ACCTGACCGA GGACCTGCGG ATCGGGGCCG CCTTCATCGC GCGCGACTCC
GATCTCGACA TCGACGGCCG CGGCGCGGGC GGGATCGTCG ATACGGACGA CCGGGCGCTC
AGCCGGCTGA GGGGCGGCAG GATCTTTGCG GACTTCACCC TCGGCCAGGT GCAGAGCGTG
CTCGCCTATG CCGCTACCGA CACGCGCCGG GAATATCCCG GCGGCTATAC CGAAGTCTTT
GAAGGCGAAC GGCGGGCGCT CTCCTACCTC GGGACGGTCG ACGTGGGGCT GGCGAGCCTC
TCGTTCGGGG CCGAGCGTAC GAAGGAGAGC TTCAGCAGGG ACAGGGATGA GGGCGATCTC
ACCACCGACT CCGTCCTCGG CGAGGCGCGC CTCGCGCTCT CGCCTGACCT CGATCTGTCG
ATGGCGGCGC GGCGCGACGA CCCGTCCGAC TTCGACGGCA AGACCACCGG GCGCGTGGCG
CTGGCCTGGC GGCTGGCCGA CGACCTGATC CTGCGCGGCG TGGCCGGAAC CGGCTTCCGG
GCGCCGTCGC TCTACGAACG GTTCGGTCCC GAAGGATCCG ATCGCCTCGG GCCGGAATCG
AGCCGCAGCT ACGAGCTCGG CCTCGAGAAA CGGTTCGGCG GCGGCGCGAT CGTTCAGGCG
ACGCTCTTCA AGACCGACGT CACCGACCGC ATCGTCTATC TGGGCGGCGC CGATTTCTGC
GCCTCAGACT TTGGCTGCTA CGATCAGCTG GACGGCGAGA CGCACAGCCA GGGGATCGAG
CTGTCGGCGC GCGCGCCGCT CGGGTCGGAG TGGGAGCTCT TCGGCAGCTA CACCTACACC
GACGCCTCCG ACGAGGCGAA CGGCACCGAG ACCCGGGCCG TCCGCGTGCC GCGGCACGAC
CTCGTTCTGG GCCTCGAGGG GCAGATCGCC GACCGCACCC GCGGGATCCT CACGGTGCAG
CATATCGCGG ATGTGATGGA CACGACCGGC TACCTGCAAC CCGATGCCCC GCTCGATGAC
TGGACGGTGG TGAATGCGAC GGTTAGCTAC GATCTGAACG ACCGGGCCGA GGCCTATGTC
CGGGTCGAGA ACCTGTTCGA CGAGGAGTAT CAGACGGTGC GCGGCTATGC CCAACCGGGG
CGTTCGATCT TTGCGGGCCT GCGTGCGCGC TTCTAG
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| Protein sequence | MKKTAASLLT LMAAAPLQAQ DIALDEILVS PSLVATETSR TGATVDVVTA EDMQATGEIS
VSDLLARLPG VSYTRNGGLG ATTTLRIRGL GSAYQAVRID GIDVADPSGT QSDFDFGSLT
AGGIDRIEVL RGSQSAIYGS EAVAGVIDIA TYRPRDPGVS GQLSLEGGSN RTFTGGLSTG
LLTERGELAF SVARTVSDGI SQAASGTERD GFDTTFYALS GAYDLTEDLR IGAAFIARDS
DLDIDGRGAG GIVDTDDRAL SRLRGGRIFA DFTLGQVQSV LAYAATDTRR EYPGGYTEVF
EGERRALSYL GTVDVGLASL SFGAERTKES FSRDRDEGDL TTDSVLGEAR LALSPDLDLS
MAARRDDPSD FDGKTTGRVA LAWRLADDLI LRGVAGTGFR APSLYERFGP EGSDRLGPES
SRSYELGLEK RFGGGAIVQA TLFKTDVTDR IVYLGGADFC ASDFGCYDQL DGETHSQGIE
LSARAPLGSE WELFGSYTYT DASDEANGTE TRAVRVPRHD LVLGLEGQIA DRTRGILTVQ
HIADVMDTTG YLQPDAPLDD WTVVNATVSY DLNDRAEAYV RVENLFDEEY QTVRGYAQPG
RSIFAGLRAR F
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