| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1058 |
|---|
| Symbol | |
|---|
| ID | 4896048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1089337 |
|---|
| End bp | 1090380 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640111645 |
|---|
| Product | cytochrome-c peroxidase |
|---|
| Protein accession | YP_001042941 |
|---|
| Protein GI | 126461827 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0622508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.212255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA CCCTCACCGT CCTGATCGCG ACGACGGCCC TCGCCGGCGC GGCTCAGGCC
GACGCCCTCC GGGACAAGGC TCTGGGATAT TTTGCCCCGC TGCCCTCGAC GGTTCCGGCC
GTGAAGGACA ACCGCATCAC CCCGGAGAAG ATCGAGCTCG GCAAGGCGCT CTTCTTCGAT
CCGCGTCTGT CGGCCTCGGG CGTCTTCTCC TGCTATTCCT GCCACAACCT CACGACGGGC
GGCGGCGACA ACCTCGAGAC CTCGATCGGC CACGGCTGGC AGAAGGGGCC GCGGAACGCG
CCCACCGTGC TCAATGCGGT GCTGAACGAG GCGCAGTTCT GGGACGGGCG GGCCGACGAC
CTGAAGGCGC AGGCCAAGGG GCCGGTGCAG GCGGGCGTCG AGATGGCGAA CACGCCCGGG
CAGGTCGAGG TGACGCTGAA ATCCCTGCCG CAATATGTCG ACTGGTTCGC CGCCGCCTTC
CCGGGCGAGC CGGAGCCCAC CAGCTTCGAC AACATGGCCA AGGCCATCGA GGCCTTCGAG
GCGACGCTCA TCACGCCTGC GCCCTTCGAC GCCTTCCTGA ACGGAGACGA TGCGGCCCTG
ACCGAGGATC AGCGGGCGGG CCTCGATCTC TTCATCGACA AGGGCTGCTC GACCTGCCAC
TCGGGCGTGA ACGTGGGCGG GCACGGCTAC TATCCGTTCG GCCTGATCGA GAAGCCCGGC
GCGGACATCC TGCCCGAGGG CGACAAGGGC CGTTTCGCGG TGACGGCCAC GGTGGACGAC
GAATATGTCT TCCGGGCGGC GCCGCTGCGC AACGTGGCGG TCACGGCGCC CTATTTCCAC
TCGGGCAAGG TGTGGGACCT GAAGACCGCC GTCACGATCA TGGCCGAGAG CCAGCTCGGC
GAGACGATGA GCGATCAGGA GGTGGGGCAG GTCGTGGCCT TCCTCGAGAG CCTCACGGGG
ACCATGCCGC CGGTCACGCT GCCGGTGCTG CCTGCCGAGA CGGCAGGCAC GCCGCGCCCC
ACGGCCGAGA TCCGGGTCGA GTGA
|
|---|
| Protein sequence | MRLTLTVLIA TTALAGAAQA DALRDKALGY FAPLPSTVPA VKDNRITPEK IELGKALFFD
PRLSASGVFS CYSCHNLTTG GGDNLETSIG HGWQKGPRNA PTVLNAVLNE AQFWDGRADD
LKAQAKGPVQ AGVEMANTPG QVEVTLKSLP QYVDWFAAAF PGEPEPTSFD NMAKAIEAFE
ATLITPAPFD AFLNGDDAAL TEDQRAGLDL FIDKGCSTCH SGVNVGGHGY YPFGLIEKPG
ADILPEGDKG RFAVTATVDD EYVFRAAPLR NVAVTAPYFH SGKVWDLKTA VTIMAESQLG
ETMSDQEVGQ VVAFLESLTG TMPPVTLPVL PAETAGTPRP TAEIRVE
|
|---|
| |