| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1054 |
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| Symbol | |
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| ID | 4895117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1085423 |
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| End bp | 1086532 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640111641 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001042937 |
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| Protein GI | 126461823 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.836355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.241062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTTTC CGGCCGCGCC TCTCTACATC GGCTCCGAGA TCTATCGCCG GTCGAGCTAC
GGTGGCAGGC ATCCGCTGCG CGTGCCGCGG GTCTCGACCG TGACGGATCT CGGCCGCGCG
CTCGGCTGGC TGCCGGCTGC CAGCTTCCGC ACCGCGCCCC GGGCCAAGCC CGCCGCGCTC
ACCCTCTGGC ACGATCCGGC CTATGTGGCG GCGCTGGCGG CGGCCGAGGC GGGGCTTGCC
GCGCCCGAAC TGCTGGCCGC CCACGGGCTC GGCACGCTCT CGAACCCGGT CTTTCCCGAG
ATGTTCCGCC GGCCCGCGAC CGGCGCGGGG GGCGTCATGC TCGCAGCCGA GCTGCTGCGC
GGCGGCGGCG CGATCCATGT GCCGGGCGGA GGCACGCACC ACGGGATGCG CGACCGGGCG
AACGGCTTCT GCTATCTGAA CGATCCGGTG CTGGGGATGC TGGTCCTGCG CCGGATGGGG
CTCCGGCGCA TCGCCTATGT CGATATCGAC GCCCATCATC CCGACGGGGT GGAGGCGGCC
TTCGCGGGCG ATCCCGAGGC GCTCCTGATC TCGGTGCACG AGGAGGGGCG CTGGCCCTTC
ACCGGTGCGC TCGAGGACGA GGGCGGCGGC ACCTGCTTCA ACCTGCCGGT GCCGCGCGGG
TTCAACGACA CCGAGATGCG GGCGGTGCTC GAGGGGCTGA TCCTGCCGCG GCTCGCGGCC
TTCCGCCCCG AGGCTCTGGT GCTGCAATGC GGGGCCGATG CGCTGGAGGA GGATCCGCTG
TCGCGGCTCT CCCTCTCGAA CAACGTTCAT TTCGAGGTGG TGGCGGCGCT GCGTCCGGTG
GCGCCGCGCT TTCTCGTGCT CGGCGGCGGC GGCTACAACC CGTGGTCGGT CGGTCGCTGC
TGGGCGGGCG TCTGGGCCAC GCTGGCGGGC CACGAGATCC CCGACCGTCT GCCGGAGGCG
GCGCGCGCGG TGCTGGCGGG CCTCGACTGG GGCGGGGGCG GGCGTCCTCC GCCGGCGCCC
GCGCTGATCG AGACGCTGCG CGACGCGCCG CGGGAGGGGC CGGTGCGGCC GGAGATCCGG
GAGAGGCTCG CCCGCCTCGC GCGGCGATGA
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| Protein sequence | MAFPAAPLYI GSEIYRRSSY GGRHPLRVPR VSTVTDLGRA LGWLPAASFR TAPRAKPAAL
TLWHDPAYVA ALAAAEAGLA APELLAAHGL GTLSNPVFPE MFRRPATGAG GVMLAAELLR
GGGAIHVPGG GTHHGMRDRA NGFCYLNDPV LGMLVLRRMG LRRIAYVDID AHHPDGVEAA
FAGDPEALLI SVHEEGRWPF TGALEDEGGG TCFNLPVPRG FNDTEMRAVL EGLILPRLAA
FRPEALVLQC GADALEEDPL SRLSLSNNVH FEVVAALRPV APRFLVLGGG GYNPWSVGRC
WAGVWATLAG HEIPDRLPEA ARAVLAGLDW GGGGRPPPAP ALIETLRDAP REGPVRPEIR
ERLARLARR
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