| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1037 |
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| Symbol | tdh |
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| ID | 4896461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1071301 |
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| End bp | 1072326 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640111624 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001042920 |
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| Protein GI | 126461806 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.210217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCAC TGGTGAAGGC CAAGGCGGAG CCGGGCCTCT GGATGGAAGA GCGGCCCGTG
CCCGAGATCG GCCCCGACGA GGTGCTCATC CGGGTCCGCA AGACGGGGAT CTGCGGCACC
GATGTCCATA TCTGGAACTG GGACGACTGG GCGGCGAAGA CGGTGCCGGT GCCGCTCGTC
ACCGGGCACG AGTTTGCGGG CGAGATCGTC GAGGTGGGCC GCGACGTGCG CGACCTCAGC
CCGGGCCAGC GCTGCTCGGG CGAGGGCCAT CTGATCGGCC ACCATTCGCG GCAGGTGCGG
GCCGGGCGCT TCCATCTCGA TCCCGAGACG CGCGGCATCG GCGTCAATGT GCCGGGCGCC
TTCGCCGACT ATCTGCGGCT TCCCGCCTTC AACGTGGTGC CGCTGCCCGA TGCCATCGAC
GACGAGGTGG GGGCGATCCT CGATCCCCTC GGCAATGCCG TTCACACGGC GCTCAGCTTC
GATCTGGTGG GAGAGGATGT GCTCGTGACC GGCGCAGGCC CCATCGGGAT CATGGCCGCG
GCTGTGGCGC GGCATGTCGG CGCGCGCCAT GTCGTCATCA CCGACGTCAA TGCCGACCGG
TTGCGGCTGT CAACCGAGGT GGCCGATGTG GTGCCGGTCA ATGTGGCGAC CGAGGATCTG
CGTTCGGTGA TGGGCCGGCT GAAGATCGTG CAGGGCTTCG ACGTGGGGAT GGAAATGTCG
GGCGCGCCCG CGGGCTTCGA CCAGATGGTC GAAGCGATGG TGATGGGCGG TCGCATCGCG
ATGCTGGGGA TCCCGCCCGG CCGCAGCCCC GTGGACTGGA GCAGGATCGT CTTCAAGGCG
CTGACCATCA AGGGCGTCTA CGGCCGCGAG ATCTTCGAGA CCTGGTACAA GATGATCGCG
ATGCTGGAGA ACGGGCTCGA TATCCGGCGC GTCATCACCC ACCGCTTTCC TGTGGCGGAT
TTCGCCGAGG GTTTTGCCGC CATGCGCAGC GGCGCGTCGG GCAAGGTGGT GCTGGACTGG
GGCTGA
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| Protein sequence | MRALVKAKAE PGLWMEERPV PEIGPDEVLI RVRKTGICGT DVHIWNWDDW AAKTVPVPLV
TGHEFAGEIV EVGRDVRDLS PGQRCSGEGH LIGHHSRQVR AGRFHLDPET RGIGVNVPGA
FADYLRLPAF NVVPLPDAID DEVGAILDPL GNAVHTALSF DLVGEDVLVT GAGPIGIMAA
AVARHVGARH VVITDVNADR LRLSTEVADV VPVNVATEDL RSVMGRLKIV QGFDVGMEMS
GAPAGFDQMV EAMVMGGRIA MLGIPPGRSP VDWSRIVFKA LTIKGVYGRE IFETWYKMIA
MLENGLDIRR VITHRFPVAD FAEGFAAMRS GASGKVVLDW G
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