Gene Rsph17029_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1025 
Symbol 
ID4895602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1057846 
End bp1058502 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID640111612 
ProductL-fuculose-phosphate aldolase 
Protein accessionYP_001042908 
Protein GI126461794 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.916457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA TGAGCGATCT GTCCGACCTC GCCAAGCGCG AAGAGATCAT CCGCCAGTGT 
CTCGAGATGA ACCGCTCGGG CCTCAATCAG GGCACCTCGG GCAACATCTC GGTGCGCCAC
GGCGAGGGGA TGCTGATCAC CCCCACGTCG CTGCCCTACG ACACGCTGGT TCCCGAGGAC
ATCGTCTTCG TCTCGATGGA GGGCGAGGTG CGGGGCCGGC ACAAGCCGTC GAGCGAATGG
CGCTTCCACC GCGACATCCT GCGCGAGCGG GCGGACGTGA ATGCGGTGGT GCATGCGCAT
CCGACCTACT GCACCACGCT CGCCATCATG AACCGCGAGA TCCCCTCGAT CCACTACATG
CTGGCGGTGG TGGGCGGCCC GAACATCCGC TGCGCGCCCT ACGCGATCTA CGGTTCGGAG
GAGCTGTCGC GGAACGCGGT CGAGGCGCTG CGCGACCGCA AGGCCTGCCT TCTCGAACAT
CACGGCATGA TCGCCGTGGG CAAGAGCCTC GCGCAGGCCA TGTGGCTCGC CGTCGAGGTC
GAGACGCTGG CCCGGCAGTA TCACGGCTGC CTTCAGATCG GCGAGCCGCG GCTGCTGAGC
GAGCGGCAGA TCCAGGACGT GATCGACAAG ATCGCCGGCT ACGGCCACCA GGGCTGA
 
Protein sequence
MNEMSDLSDL AKREEIIRQC LEMNRSGLNQ GTSGNISVRH GEGMLITPTS LPYDTLVPED 
IVFVSMEGEV RGRHKPSSEW RFHRDILRER ADVNAVVHAH PTYCTTLAIM NREIPSIHYM
LAVVGGPNIR CAPYAIYGSE ELSRNAVEAL RDRKACLLEH HGMIAVGKSL AQAMWLAVEV
ETLARQYHGC LQIGEPRLLS ERQIQDVIDK IAGYGHQG