Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1025 |
Symbol | |
ID | 4895602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1057846 |
End bp | 1058502 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640111612 |
Product | L-fuculose-phosphate aldolase |
Protein accession | YP_001042908 |
Protein GI | 126461794 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.916457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGA TGAGCGATCT GTCCGACCTC GCCAAGCGCG AAGAGATCAT CCGCCAGTGT CTCGAGATGA ACCGCTCGGG CCTCAATCAG GGCACCTCGG GCAACATCTC GGTGCGCCAC GGCGAGGGGA TGCTGATCAC CCCCACGTCG CTGCCCTACG ACACGCTGGT TCCCGAGGAC ATCGTCTTCG TCTCGATGGA GGGCGAGGTG CGGGGCCGGC ACAAGCCGTC GAGCGAATGG CGCTTCCACC GCGACATCCT GCGCGAGCGG GCGGACGTGA ATGCGGTGGT GCATGCGCAT CCGACCTACT GCACCACGCT CGCCATCATG AACCGCGAGA TCCCCTCGAT CCACTACATG CTGGCGGTGG TGGGCGGCCC GAACATCCGC TGCGCGCCCT ACGCGATCTA CGGTTCGGAG GAGCTGTCGC GGAACGCGGT CGAGGCGCTG CGCGACCGCA AGGCCTGCCT TCTCGAACAT CACGGCATGA TCGCCGTGGG CAAGAGCCTC GCGCAGGCCA TGTGGCTCGC CGTCGAGGTC GAGACGCTGG CCCGGCAGTA TCACGGCTGC CTTCAGATCG GCGAGCCGCG GCTGCTGAGC GAGCGGCAGA TCCAGGACGT GATCGACAAG ATCGCCGGCT ACGGCCACCA GGGCTGA
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Protein sequence | MNEMSDLSDL AKREEIIRQC LEMNRSGLNQ GTSGNISVRH GEGMLITPTS LPYDTLVPED IVFVSMEGEV RGRHKPSSEW RFHRDILRER ADVNAVVHAH PTYCTTLAIM NREIPSIHYM LAVVGGPNIR CAPYAIYGSE ELSRNAVEAL RDRKACLLEH HGMIAVGKSL AQAMWLAVEV ETLARQYHGC LQIGEPRLLS ERQIQDVIDK IAGYGHQG
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