Gene Rsph17029_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1023 
Symbol 
ID4897804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1056047 
End bp1056883 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID640111610 
ProductUbiC transcription regulator-associated domain-containing protein 
Protein accessionYP_001042906 
Protein GI126461792 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.196413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTCAGG GACAGCACAG CACCGTTCAG CGCCGCGGGC GTCCGAGCTA TGACATGGAG 
GACGGCGACA GCGCCGAGGC CTTCCGCGCC TTCGCTGCGG GCGTCGCCCT TCAGCGCGAG
GATCCGAGCC CGCTCTGGGT GCAGCTGAAG AACCGGATCG AGCACGCCAT CCTCGACGGA
ACCCTCCCCG AGAACGCGCG CCTGCCCTCC GAGCAGGCCA TGTGCAGCAT GTTCGACCTG
TCGCGTCCGG TGATCCGCAA TGCGCTGCAG GCGCTCGCGG GCGAGGGGCG GGTCATCAAG
CAGCCGAGGA AAGGCATGTT CGTGGCCCCC CGGGCGCCCG AGCTTGCCTT CATGACCTCG
GCGCTCGGCG TCTTCGACGA TCTCTCGGCC AAGGGTTACA AGGTCACGGT CAAGACCTAC
GAATTCGGCC TGCATCCGGC CAACGAGGAC GAACGGCGCG TCTTCAAGCT GCCCGAGGGA
TTTCAGGTGA TCCGGGCGCT GCGGGTCTAT CACGCGAACG AGACGCCGCT GACCCATACG
CTGATCTCGC TGCCCGCACA CCGGCTGCCC GGCTTCGAGA AGCTCGATAT GGAAGGGCGC
TCGATCTTCG GCACGATCCG GGAGCTCTAC GGTCTGACGG TCGCGCGGGC GGATCGCTGG
CTGAAGGGTG CCATCGTTCC GCCGGAGGTG GCGGCGCGGA TGGGCGTGCC GCCCGGCGGC
GCCATGATCG CCATCGAGTC GGTCGCCTAC GACCACGACG GCAATGCGCT CGAATATTAC
CGCGCCTACT ACAACAGCGA AGTCGCCCCG ATCCACGTCG CAACCGACGC CCATTAA
 
Protein sequence
MAQGQHSTVQ RRGRPSYDME DGDSAEAFRA FAAGVALQRE DPSPLWVQLK NRIEHAILDG 
TLPENARLPS EQAMCSMFDL SRPVIRNALQ ALAGEGRVIK QPRKGMFVAP RAPELAFMTS
ALGVFDDLSA KGYKVTVKTY EFGLHPANED ERRVFKLPEG FQVIRALRVY HANETPLTHT
LISLPAHRLP GFEKLDMEGR SIFGTIRELY GLTVARADRW LKGAIVPPEV AARMGVPPGG
AMIAIESVAY DHDGNALEYY RAYYNSEVAP IHVATDAH