Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1012 |
Symbol | |
ID | 4896860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1047192 |
End bp | 1047923 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640111598 |
Product | peptidase M48, Ste24p |
Protein accession | YP_001042895 |
Protein GI | 126461781 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGGT TCGGGTTTGC CGCCGTTCTA CTGGTGCTGG CGGGCTGTTC CGCCCCGATG GGGCCAGAGG CTCTGGGGCC GGGAAGCTAT CAGGCCGCGC CCGATCCGGG ACCGTTCCTG ACCCCTGCCG ATGCGCAGCG GGCCTTTCCG GCCGTGGTGG CGCGCGTCGA GCCGGTGGCC GAGGCCATCT GCCGCGAACG CACCCGCGGC GTGCCCTGCG ATTTCCAGAT CGCCGTCGAT GCCCGTCCGG GGCTCGATCC GAATGCCTTC CAGACGCTCG ACGATTACGG ACGGCCGGTG ATCGGCCTCA CCCTCTCGCT CATCAGCGAC GCGCGCAACG TGGACGAGCT GGCCTTCGTC GTGGGCCACG AGACGGCGCA CCATATCCTC GGCCACATCC CCCGCCAGCG CGAGACGGCG CTGACCGGCG CGGTGCTGGC GGGCGTGCTG GCGCAGATGG GCGGGGCCGA TGCCCAGACG ATCCGCTCGG TGCAGGAGTT CGGCGCCAAT GTGGGCGCGC GGAGCTACTC GAAGAATTTC GAGCTCGAGG CCGACGGGCT CGGGACCGAG ATCGCGATCC GGGCCGGATA CGATCCGGTG CATGGCGCGC AGTTCTTCAC CCGCCTGCCC GATCCGGGCG ACACGTTCCT CGGCAGCCAC CCGCCCAATG CGCAGCGCAT CGCCGCGGTG CGCCGCGCGG CCGAGAGCAT CGGATATGTC AGCGCCTGGT AA
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Protein sequence | MLRFGFAAVL LVLAGCSAPM GPEALGPGSY QAAPDPGPFL TPADAQRAFP AVVARVEPVA EAICRERTRG VPCDFQIAVD ARPGLDPNAF QTLDDYGRPV IGLTLSLISD ARNVDELAFV VGHETAHHIL GHIPRQRETA LTGAVLAGVL AQMGGADAQT IRSVQEFGAN VGARSYSKNF ELEADGLGTE IAIRAGYDPV HGAQFFTRLP DPGDTFLGSH PPNAQRIAAV RRAAESIGYV SAW
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