Gene Rsph17029_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1012 
Symbol 
ID4896860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1047192 
End bp1047923 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content71% 
IMG OID640111598 
Productpeptidase M48, Ste24p 
Protein accessionYP_001042895 
Protein GI126461781 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGGT TCGGGTTTGC CGCCGTTCTA CTGGTGCTGG CGGGCTGTTC CGCCCCGATG 
GGGCCAGAGG CTCTGGGGCC GGGAAGCTAT CAGGCCGCGC CCGATCCGGG ACCGTTCCTG
ACCCCTGCCG ATGCGCAGCG GGCCTTTCCG GCCGTGGTGG CGCGCGTCGA GCCGGTGGCC
GAGGCCATCT GCCGCGAACG CACCCGCGGC GTGCCCTGCG ATTTCCAGAT CGCCGTCGAT
GCCCGTCCGG GGCTCGATCC GAATGCCTTC CAGACGCTCG ACGATTACGG ACGGCCGGTG
ATCGGCCTCA CCCTCTCGCT CATCAGCGAC GCGCGCAACG TGGACGAGCT GGCCTTCGTC
GTGGGCCACG AGACGGCGCA CCATATCCTC GGCCACATCC CCCGCCAGCG CGAGACGGCG
CTGACCGGCG CGGTGCTGGC GGGCGTGCTG GCGCAGATGG GCGGGGCCGA TGCCCAGACG
ATCCGCTCGG TGCAGGAGTT CGGCGCCAAT GTGGGCGCGC GGAGCTACTC GAAGAATTTC
GAGCTCGAGG CCGACGGGCT CGGGACCGAG ATCGCGATCC GGGCCGGATA CGATCCGGTG
CATGGCGCGC AGTTCTTCAC CCGCCTGCCC GATCCGGGCG ACACGTTCCT CGGCAGCCAC
CCGCCCAATG CGCAGCGCAT CGCCGCGGTG CGCCGCGCGG CCGAGAGCAT CGGATATGTC
AGCGCCTGGT AA
 
Protein sequence
MLRFGFAAVL LVLAGCSAPM GPEALGPGSY QAAPDPGPFL TPADAQRAFP AVVARVEPVA 
EAICRERTRG VPCDFQIAVD ARPGLDPNAF QTLDDYGRPV IGLTLSLISD ARNVDELAFV
VGHETAHHIL GHIPRQRETA LTGAVLAGVL AQMGGADAQT IRSVQEFGAN VGARSYSKNF
ELEADGLGTE IAIRAGYDPV HGAQFFTRLP DPGDTFLGSH PPNAQRIAAV RRAAESIGYV
SAW