| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0998 |
|---|
| Symbol | |
|---|
| ID | 4895565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1030551 |
|---|
| End bp | 1031417 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640111584 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_001042881 |
|---|
| Protein GI | 126461767 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.962944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTGT CCAGCATCGA GGAACTCATG CGCTCGGCGC TGCCCGACAT GACCCGGGCC
GAACGCCAGC TCGCCACGCA TATCCTGCGG CAGTATCCGG TGGCGGCGCT CGGCTCGATC
ACGGCGCTCG CCAAGGCGGC CGACGTCTCG ACGCCGACGG TGGTGCGTCT GGTGCAGAAG
CTGGGGTTCA AGGGCTATCC CGACTTCCAG TCGGGCCTGC GCGGCGAGGT CGAGGCGATG
CTGCTTTCCC CTCTGGCCAA GCACGACCGC TGGGCCGGCG GGGTGCCCGA CACCCACATC
CTCAACCGGT TCGCCGATGC GGTGGTGGCC AATCTTCAGG CGACGCTGAG CCAGATCGAC
CATGCCGAGT TCGATGCGGC GGCGCACCTC CTTGCGGATC CCGAGCGGCG GATCTTCGTC
CTCGGCGGCC GCATCACCCA TGCGCTGGCC GACTATTTCG CCACCCTGAT GAAGGTGACC
CGTCCGGAGG TCACGCTCAT GTCCGACATG TCGAGCACCT GGCCGCCGGC GCTCCTCGAC
ATGGGGCGGG GCGACATCCT CCTGCTCTTC GACATCCGCC GCTACGAGAA CATGGTGCTG
CAGGTGGCCG AGATGGCGGT CGAGCAGGGG GTCGAGGTGG TGCTGATGAC CGACCGCTGG
ATCTCGCCCG CGGCGGTCCA TGCGCGCCAC ACCTTCTCCT GCCAGATCGA GGTGCCGTCA
GCCTGGGATT CGACGGTTGC CATGCTGGTG CTGGTCGAGA GCCTGATCTC GGCGGTGCAG
AGCCTGACCT GGGAGCAGAC GGAAGAGCGG ATGAAGCGGC TCGAGGATCT CTACGCCCGC
AACCGCATCT TCCGCCGCCA CCGTTAG
|
|---|
| Protein sequence | MGLSSIEELM RSALPDMTRA ERQLATHILR QYPVAALGSI TALAKAADVS TPTVVRLVQK
LGFKGYPDFQ SGLRGEVEAM LLSPLAKHDR WAGGVPDTHI LNRFADAVVA NLQATLSQID
HAEFDAAAHL LADPERRIFV LGGRITHALA DYFATLMKVT RPEVTLMSDM SSTWPPALLD
MGRGDILLLF DIRRYENMVL QVAEMAVEQG VEVVLMTDRW ISPAAVHARH TFSCQIEVPS
AWDSTVAMLV LVESLISAVQ SLTWEQTEER MKRLEDLYAR NRIFRRHR
|
|---|
| |