Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0995 |
Symbol | |
ID | 4896560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1027776 |
End bp | 1029101 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640111581 |
Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
Protein accession | YP_001042878 |
Protein GI | 126461764 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.28292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACG AGATGATCGC CATCCTGATG TTCTCGGCCA TGCTGCTGAT GATGCTGACC GGGCAGCGCG TCTTCGGCGT GATCGGCTTC GTGGCGGTGG TGGCCTCGCT CGCGCTCTGG GGCACGGGCG GGCAGAGCAT GGGCTTCTCG GCCGCGATGA AGCTCATGAA ATGGTATCCG CTGCTGACGC TGCCCATGTT CATCTTCATG GGCTATGTCA TGAGCGAGAG CCGCCTCGCC GACGATCTTT ACCGCATGTT CCATGTCTGG TTCGGCCCCG TGCCCGGCGG CCTTGCCATC GGGACGATCC TCCTCATGGT GCTGATCTCG GCCATGAACG GCCTTTCGGT CGCGGGCATG GCCATCGGCT CGACCATCGC GCTGCCCGAG CTTCTGCGGC GGCGCTACGA CAAGCTGATG GTGACGGGCG TGATCCAGGC GGGGTCGAGC CTCGGCATCC TGATCCCACC CTCGGTGGTC CTCGTGCTCT ATGCGATGAT CGCGCGCCAG CCGGTGGGGC AGCTCTGGCT GGCCGGCGTG GTGCCGGGGC TGATGATGGC GGGCATGTTC GTGGCCTACA TCTGGCTCCG CTGCCGGCTG AACCCCGCGC TCGGCCCGGT GCTGCCGCCC GAGGAACTGG CTGCGGTGCC GCGGTCGGAA AAGATGCGCC TGCTGGCTGC GGGTCTCCTG CCGCTCGGCA TCTTCGCTGC GATGATGGTG CCCTTCGTCA ACGGCTGGAC GAGCCTTGTC GAAAGCTCGG TGATCGGGGC GCTGGTGACG GTGCTGGCCG CGGTCGTGAA GGGCCGCTTC ACCCGCGAGG TGTTCGAGAC CTCGACGCGG GCGACGCTCG CCATCTCCTG CATGTTCATG TGGATCATCC TCGCGGCGCT GGCCTTCGGC GCGGTCTTCG ACGGTCTGGG CGCCGTGCGC GCGATCCAGG GCTTCTTCGT CGACCGGCTG GAGCTGTCGC CCTGGACCAT CCTCATCATG ATGCAGCTCT CCTACCTCAT CATGGGGATG TTTCTGGACG ACACGGCGAT GCTCGTCATC GTCGCGCCGC TCTATGTGCC GCTGGTGGGC GCGCTGGGGT TCGATCTGAT CTGGTACGGC GTGCTCTACA CGATCACCTG CCAGGTGGCC TACCTCACGC CGCCCTTCGG CTACAACCTG TTCCTGATGC GCGCCATGGC GCCGCCCGAG ATCACCATCG GCGACATCTA CCGCTCGATC GTGCCGTTCG TGGGGGTCAT GGTGCTGGCG CTGGTGCTGG TGATGGCCTT CCCCGAGATC GCGCTCTGGC TGCCGGAGAC GCTCTACGCC AAGTAA
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Protein sequence | MSYEMIAILM FSAMLLMMLT GQRVFGVIGF VAVVASLALW GTGGQSMGFS AAMKLMKWYP LLTLPMFIFM GYVMSESRLA DDLYRMFHVW FGPVPGGLAI GTILLMVLIS AMNGLSVAGM AIGSTIALPE LLRRRYDKLM VTGVIQAGSS LGILIPPSVV LVLYAMIARQ PVGQLWLAGV VPGLMMAGMF VAYIWLRCRL NPALGPVLPP EELAAVPRSE KMRLLAAGLL PLGIFAAMMV PFVNGWTSLV ESSVIGALVT VLAAVVKGRF TREVFETSTR ATLAISCMFM WIILAALAFG AVFDGLGAVR AIQGFFVDRL ELSPWTILIM MQLSYLIMGM FLDDTAMLVI VAPLYVPLVG ALGFDLIWYG VLYTITCQVA YLTPPFGYNL FLMRAMAPPE ITIGDIYRSI VPFVGVMVLA LVLVMAFPEI ALWLPETLYA K
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