Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0953 |
Symbol | |
ID | 4896456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 980545 |
End bp | 981369 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640111539 |
Product | ABC transporter related |
Protein accession | YP_001042836 |
Protein GI | 126461722 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.513158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCGC TCGAGGTGAC GATGGACGAA ACCGGCGCCG ACGAGCGCCG CATCGGCGGG GTGCTGATGG AGATGAAGAA CATCACGCTC CGCTTCGGCG GCGTGAAGGC CATCACCGAC ATCAGCTTCG ACATCCGCGA GGGCGAGATC CGCGCGATCA TCGGGCCGAA CGGGGCCGGC AAATCCTCGA TGCTGAACGT GATTTCGGGC TTCTATGTGC CGCAGGAGGG CGAGGTCTGG TTCCGCGGAA AGCGGCGGCC GCAGATGAAG CCCTATGAGG TGGCCCAGCA GGGCATCGCC CGCACCTTCC AGAACATCGC CCTCTTCGAG GGGATGAGCG TGCTCGACAA CATCATGACC GGCCGCCTCA CGCTGATGAA GACCGGCCTC TGGAGCCAGG CGCTCTGGTG GGGCCGCGCG CAGGCCGAGG AGGTCGAGCA TCGCGCGAAG GTCGAGAGGA TCATCGACTT CCTCGAGATC CAGCACATCC GCAAGACCCC GGTCGGCCGC CTGCCCTACG GGCTCAAGAA GCGGGTGGAG CTTGCCCGCG CGCTGGCCAC CGAGCCGAAG CTCCTGCTGC TCGACGAGCC GATGGCGGGC ATGAACGTCG AGGAGAAGGA GGACATGTGC CGCTTCATCC TCGACACGAA CGACGAGTTC GGCACGACCA TCGCGCTGAT CGAGCATGAC ATGGGGGTGG TCATGGACCT CTCGGACCGC GTCGTGGTGA TGGACTACGG CAAGAAGATC GGCGACGGCA CCCCCGACGA GATCCGCAGC AACAAGGCCG TGATCGACGC CTATCTGGGG GTGCAGCATG ACTGA
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Protein sequence | MNALEVTMDE TGADERRIGG VLMEMKNITL RFGGVKAITD ISFDIREGEI RAIIGPNGAG KSSMLNVISG FYVPQEGEVW FRGKRRPQMK PYEVAQQGIA RTFQNIALFE GMSVLDNIMT GRLTLMKTGL WSQALWWGRA QAEEVEHRAK VERIIDFLEI QHIRKTPVGR LPYGLKKRVE LARALATEPK LLLLDEPMAG MNVEEKEDMC RFILDTNDEF GTTIALIEHD MGVVMDLSDR VVVMDYGKKI GDGTPDEIRS NKAVIDAYLG VQHD
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