| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0940 |
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| Symbol | |
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| ID | 4895386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 967378 |
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| End bp | 968847 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640111525 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001042823 |
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| Protein GI | 126461709 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.811015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.643203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA GCAAAGACGG CGAGCGCATC GCCAAGGTTC TCTCTCGTGC GGGCATCGCC
TCGCGCCGCG ACGCCGAGCG GATGATCGAG CTTGGCCGCA TCGCGGTGAA CGGGCGCACC
ATCGACAGCC CGGCGCTGAA TGTGGGCCCG AAGGACCGCA TCACCGTCGA CGGCCAGCCC
CTGGCGCCGC CCGAGCCCGC CCGCCTGTGG CTCTATTACA AGCCCGAGGG ACTCGTCACC
TCGGCCTCGG ACGAGAAGGG CCGCGAGACG GTCTTCGACC ACCTGCCCGA GGGGATGCCC
CGCGTCATGT CGGTGGGACG GCTCGATCTC AATTCCGAGG GTCTCCTCCT CCTGACCAAT
GACGGCGAAC TGAAGCGCCG GCTCGAGCTG CCCTCCACCG GCTGGCTGCG CAAGTACCGC
GTGCGGGTGA AGGGCAACCC GACCGACGCC GACCTCGAGC CGCTGCGCAA GGGGATCACG
GTCGAGGGCG AGAGCTTCCA GCCGATGACC GTCTCGCTCG ACCGGGTGCA GGGCGCCAAC
GCCTGGCTCA CGGTGGGCCT CCGCGAGGGC AAGAACCGCG AGATCCGCCG CGCCATGTCC
GCCCTGGGCC TCACCGTGAA CCGGCTGATC CGCGTGAGCT ACGGTCCCTT CCGGCTGAAC
GAGCTCGAGC CCGGCATGGT CGAGGAGGTG CGCCCCAAGA TCCTGCGCGA CCAGCTCGGC
CTCGATCCGC ATGCCGACGG CGAGGCGCGC CCGGCCAGGG GACGGAAGCC CGAAGGTGCC
GCACGAGCCG AAGGCGCCGC ACGCTCCGAA AGAACCGCGC GTCCGCCGCG CGGGGCCGCG
GCGGAGGGAC CCACCCGCCC GGCTCGGGCA GCGGGGTCCG AAGGCTCCGC AGGCGCCACC
AGAGGGCGCT CGCCGCAGGG GGCTGCGCCC AAGGCAGGGG CGCCCAAGGA CGGGGCACGC
TTCGCAGGCA AAGGCCCGGC CGAGGGTGCG CGCCCGGCGC GGAGCGCCGC AACGGACCCC
GCGCGCGCCT CCCGACCAGC GAGCACCGAG ACCACCGGAC GCACCCGAAC GGCGGAGGGC
CGAGGCAAAC CCGCCGCCGC AGGACGGTCC GGCAAGACCG AGGCGGCCGA CGCGCCGCGT
GCGTTCCGCA GCCGCAGCGC CGAGGCGCCC GCCAAGGGTC CGCGCGGTCC GGCCAAGGCC
GCGGGTCCGG CCCGCAGCCG GCGAGAAGCC CTGCCCGACA CGCCGATCGA CGCCCGTGCG
CCGCGGGGTC GCGCCGCGGC GGGTCCGAAG GCCAAGGGCG GCAGTCCGGC CAAGGCCGCC
CCCACTCCGC GCGCCAAGGG AGCGGGCGAG ACCGCCGGCG GACGGGGCCC CCGGACGGGC
GGGCCGTCTG CCCAGGGGGA CCGGAAACCG CAGCCCACAG GCCCCCGCCC GCCCTCGCGC
GGACCGAAAG GCCGGCCCGG CGGGCGCTGA
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| Protein sequence | MTDSKDGERI AKVLSRAGIA SRRDAERMIE LGRIAVNGRT IDSPALNVGP KDRITVDGQP
LAPPEPARLW LYYKPEGLVT SASDEKGRET VFDHLPEGMP RVMSVGRLDL NSEGLLLLTN
DGELKRRLEL PSTGWLRKYR VRVKGNPTDA DLEPLRKGIT VEGESFQPMT VSLDRVQGAN
AWLTVGLREG KNREIRRAMS ALGLTVNRLI RVSYGPFRLN ELEPGMVEEV RPKILRDQLG
LDPHADGEAR PARGRKPEGA ARAEGAARSE RTARPPRGAA AEGPTRPARA AGSEGSAGAT
RGRSPQGAAP KAGAPKDGAR FAGKGPAEGA RPARSAATDP ARASRPASTE TTGRTRTAEG
RGKPAAAGRS GKTEAADAPR AFRSRSAEAP AKGPRGPAKA AGPARSRREA LPDTPIDARA
PRGRAAAGPK AKGGSPAKAA PTPRAKGAGE TAGGRGPRTG GPSAQGDRKP QPTGPRPPSR
GPKGRPGGR
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