Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0928 |
Symbol | |
ID | 4897630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 953963 |
End bp | 955750 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640111513 |
Product | lipid ABC transporter ATPase/inner membrane protein |
Protein accession | YP_001042811 |
Protein GI | 126461697 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.141758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGAA GACCCACCAC CCAGCTCGAG GATCGTCCGA AGTCGAGGAG GATGAGCGCG CTGCGGGGCC TCGTGCCGTT CCTCGCGCCC TACCGCAAGC TCACCTTCGG CGCGCTGGGC GCGCTCGTTC TCACCGCGAT CATCAGCCTG ATCCTGCCGG TGACGGTCCG GCGCGTGGTC GACGGCTTCA TGGAGAACAA TGCGGCCCTG CTCGACCAGT ATTTCGCCGC CGCCCTCTTC ATTGCGGCCG CACTCGCTGC AGGCACGGGG CTGCGCTACT ATCTCGTGAC GCGGCTCGGC GAGCGGGTCG TGGCCGACAT GCGCCGCGCG CTCTTCGACC GGATGATGGG CATGAGCCCC GCCTTCTTCG AGCGGATCAT GACGGGCGAG GTGCTGTCGC GGCTCACGAC CGACACGACG CTGCTTCTGT CGGTGATCGG CTCCTCGATC TCGGTGGCGC TGCGCAACCT CCTGATCCTG ATCGGCGGGC TGGTGCTTCT GCTGTTCACC TCGACCAAGC TCACCGGCCT CGTGATGCTG CTCGTGCCGC TCGTGGTGGT GCCGATCGTC ATCCTCGGCC GCAAGCTCCG CCGCCTCTCG CGCGAGAACC AGGACTGGAT CGCCCAGAGC TCGGGCAATG CCTCCGAGGC GCTCCTGTCG GTGCAGACGG TGCAGGCCTT CACCCACGAG CGCCAGTCGC GCGCCTTCTT CGGCGATGTG ACCGAGAAGT CCTTCCTGTC GGCCAAGGAC CGGATCGGGA CGCGGGCGCT GATGACGGTG ATCGTGATCT TCCTCGTCTT CACCGGGATC GTGGGCGTGC TCTGGGTGGG CGCGCGCGAT GTGCGCGCGG GCACCATGAC GCCGGGCGAG ATGGTGCAGT TCCTCATCTA TGCGGTGATG GTGGCGGGTT CGGTCGGCGC GCTGTCCGAG ATCTGGAGCG AGCTGCAGCG GGCGGCGGGC GCGACCGAGC GGCTGAACGA GCTGCTGACG GCCGAGGATC CGGTGCAGGA TCCGGCCACG CCGGTGGCGC TGCCGCGGCC CGTGAAGGGC GAGATCAGCT TCGAGGGCGT GCGTTTCCGC TATCCGGCGC GGCCCGAGGT CTCGGCGCTC GACGGGATCG ATCTCGTGGT GCGGCCGGGC GAGACGGTGG CGCTTGTGGG GCCGTCGGGG GCGGGCAAGA CCACGATCCT CCAGCTGCTC CTGCGCTTCT ACGATCCCCA GCAGGGGGCC GTGCGGATCG ACGGTGTGGA TCTGCGCGAC ATGACGCGCG ACGATTTCCG CCGTGCCATC GCCCTCGTGC CGCAGGATCC GGTGATCTTC GCCACCTCCG CGCGCGAGAA CATCCGCTTC GGACGTCCCG AGGCCACGGA TGCCGAGGTG GAGGCCGCGG CCCGCGCCGC CGCCGCGCAC GATTTCCTGA GCCTGCTGCC GCAGGGCTAC GACACCTATG TGGGCGAGCG CGGCGTGATG CTCTCGGGCG GGCAGAAGCA GCGCGTGGCG CTGGCGCGGG CGATCCTGCG CGATGCGAAG ATCCTGCTCC TCGATGAGGC GACCTCGGCG CTCGATGCCG AGAGCGAGCG GGCCGTGCAG ACCGCGGTCG AGGCGCTGGC GCAGAACCGC ACGACGCTGG TGGTGGCCCA CAGGCTCGCC ACCGTGAAGC GCGCGGACCG GATCGTCGTC TTCGACAAGG GCCGCATCGT GGCGACCGGC ACCCACGATG CGCTGGTGGC CGAGGGGGGG CTCTATGCCC GTCTCGCGCG GCTCCAGTTC ACCGACGGGT CGGTCTGA
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Protein sequence | MARRPTTQLE DRPKSRRMSA LRGLVPFLAP YRKLTFGALG ALVLTAIISL ILPVTVRRVV DGFMENNAAL LDQYFAAALF IAAALAAGTG LRYYLVTRLG ERVVADMRRA LFDRMMGMSP AFFERIMTGE VLSRLTTDTT LLLSVIGSSI SVALRNLLIL IGGLVLLLFT STKLTGLVML LVPLVVVPIV ILGRKLRRLS RENQDWIAQS SGNASEALLS VQTVQAFTHE RQSRAFFGDV TEKSFLSAKD RIGTRALMTV IVIFLVFTGI VGVLWVGARD VRAGTMTPGE MVQFLIYAVM VAGSVGALSE IWSELQRAAG ATERLNELLT AEDPVQDPAT PVALPRPVKG EISFEGVRFR YPARPEVSAL DGIDLVVRPG ETVALVGPSG AGKTTILQLL LRFYDPQQGA VRIDGVDLRD MTRDDFRRAI ALVPQDPVIF ATSARENIRF GRPEATDAEV EAAARAAAAH DFLSLLPQGY DTYVGERGVM LSGGQKQRVA LARAILRDAK ILLLDEATSA LDAESERAVQ TAVEALAQNR TTLVVAHRLA TVKRADRIVV FDKGRIVATG THDALVAEGG LYARLARLQF TDGSV
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