Gene Rsph17029_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0913 
Symbol 
ID4895689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp938614 
End bp940137 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content67% 
IMG OID640111498 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001042796 
Protein GI126461682 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.31457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG CTCAGAAACA GCCCGTGGAG CACCGCGGGC TGATCACCCT CGTGATCATG 
CTCGCCACGA TCATGCAGGT GCTCGACACG ACCATCGCGA ACGTGGCGCT GCCCTCGATG
ACGGGCGATC TCGACGCCTC GGCCGATACG ATCAACTGGG TGCTCACCTC CTACATCGTG
GCCGCGGCGA TCATGACGCC CGTGACCGGC TGGCTCGCCG ACCGGATCGG CAAGCGCGAG
CTGTTCCTCG TCTCCATCGT GGGCTTCACG CTGGCCTCGA TGGCCTGCGG CCTGTCCTGG
AGCCTGCCCT CGATGGTGGG CTTCCGGCTG CTGCAGGGCG TCTTCGGCGC GGCCATCGTG
CCGCTGTCGC AGACCTTCCT GCTCGACATC AACCCGCGCG AGAAGGCCGG GCAGGCCATG
GCGCTCTGGG GGGCGGGGAT CATGGTGGGG CCGATCATCG GGCCCACGCT CGGCGGCTGG
CTCACCGAGA GCTGGGACTG GCGCTGGGTC TTCTTCATCA ACCTTCCCGT GGGCATCGTG
GCCTTTCTCG GCTGCGCCGC CTGGCTGCCG CGGGCCGAGC GGGTGGTGCG CCGCTTCGAC
TTCTTCGGCT TCGCCATGCT CGCCATCGCG CTGGGCTCGC TCCAACTCAT GCTCGACCGC
GGCGCGGAGG TGGAATGGTT CGCGGCCCTC GAGATCTGGA TCTACCTGTT CCTGATGCTG
ACCGGCTTCT GGGTGTTCGT GATCCACATC CTCGGCGCCG AAAAGCCCTT CCTCGAGCCC
GCGATGTTCG CCGACCGCAA CTTTGCCACC GGCCTCGTCT TCATCTTCGT GGTGGGGATC
ATCCTCCTGG CGAGCCTCGC GCTCCTGCCG CCGATGCTGT CGCACATCTT CGGCTATCCG
GTCATCACCA CCGGCCTCGT GATGGCGCCG CGCGGGGTGG GGACGATGAT CTCGATGCTG
ATCGCCGGGC GGATGCTGCG CTTCGTCGAT GCGCGGCTGA TGGTGACGGC GGGTCTCTCG
CTCACCGCCC TGTCGCTGCA CATGATGACG GGCTTCAGCC CGCAGATGGA CAGCACGCCC
ATCGTGCTCT CGGGCGTCGT GCAGGGTCTG GGTCTGGGCC TCGTCTTCGT GCCGCTCTCG
ACCGTGGCCT TCGCCACCAT CGCGCCGCGC TTCCGCGCCG ATGCCACGAG CCTCTTCAGC
CTTGTGCGCA ACATCGGCTC GTCGGTGGGC ATCTCGATGG TGACGGTGAT GCTCACCCAC
AACAGCCAGA TCAACCATGC CGAGCTCGGG GCAAATGTGA CGCCCTACAA TCCGCAGCTC
TGGCAGCTCT CGCCCGACGC CGCGCAGGGG GGCCTGCAGT CGCTCGCGGT GATCGACCGG
CTGGTGACGC AGCAGGCCAC GATGATCGGC TATATCGACG ATTTCCGCCT GATGATGCTC
ATCACTCTGG CGGCGCTTCC GCTGGCGCTC CTGCTGCGCA AGCCCAGGGC GGGCGGCGCG
CCGGTCACCG TTCACGCGGA CTGA
 
Protein sequence
MTAAQKQPVE HRGLITLVIM LATIMQVLDT TIANVALPSM TGDLDASADT INWVLTSYIV 
AAAIMTPVTG WLADRIGKRE LFLVSIVGFT LASMACGLSW SLPSMVGFRL LQGVFGAAIV
PLSQTFLLDI NPREKAGQAM ALWGAGIMVG PIIGPTLGGW LTESWDWRWV FFINLPVGIV
AFLGCAAWLP RAERVVRRFD FFGFAMLAIA LGSLQLMLDR GAEVEWFAAL EIWIYLFLML
TGFWVFVIHI LGAEKPFLEP AMFADRNFAT GLVFIFVVGI ILLASLALLP PMLSHIFGYP
VITTGLVMAP RGVGTMISML IAGRMLRFVD ARLMVTAGLS LTALSLHMMT GFSPQMDSTP
IVLSGVVQGL GLGLVFVPLS TVAFATIAPR FRADATSLFS LVRNIGSSVG ISMVTVMLTH
NSQINHAELG ANVTPYNPQL WQLSPDAAQG GLQSLAVIDR LVTQQATMIG YIDDFRLMML
ITLAALPLAL LLRKPRAGGA PVTVHAD