Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0913 |
Symbol | |
ID | 4895689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 938614 |
End bp | 940137 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640111498 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001042796 |
Protein GI | 126461682 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.31457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTG CTCAGAAACA GCCCGTGGAG CACCGCGGGC TGATCACCCT CGTGATCATG CTCGCCACGA TCATGCAGGT GCTCGACACG ACCATCGCGA ACGTGGCGCT GCCCTCGATG ACGGGCGATC TCGACGCCTC GGCCGATACG ATCAACTGGG TGCTCACCTC CTACATCGTG GCCGCGGCGA TCATGACGCC CGTGACCGGC TGGCTCGCCG ACCGGATCGG CAAGCGCGAG CTGTTCCTCG TCTCCATCGT GGGCTTCACG CTGGCCTCGA TGGCCTGCGG CCTGTCCTGG AGCCTGCCCT CGATGGTGGG CTTCCGGCTG CTGCAGGGCG TCTTCGGCGC GGCCATCGTG CCGCTGTCGC AGACCTTCCT GCTCGACATC AACCCGCGCG AGAAGGCCGG GCAGGCCATG GCGCTCTGGG GGGCGGGGAT CATGGTGGGG CCGATCATCG GGCCCACGCT CGGCGGCTGG CTCACCGAGA GCTGGGACTG GCGCTGGGTC TTCTTCATCA ACCTTCCCGT GGGCATCGTG GCCTTTCTCG GCTGCGCCGC CTGGCTGCCG CGGGCCGAGC GGGTGGTGCG CCGCTTCGAC TTCTTCGGCT TCGCCATGCT CGCCATCGCG CTGGGCTCGC TCCAACTCAT GCTCGACCGC GGCGCGGAGG TGGAATGGTT CGCGGCCCTC GAGATCTGGA TCTACCTGTT CCTGATGCTG ACCGGCTTCT GGGTGTTCGT GATCCACATC CTCGGCGCCG AAAAGCCCTT CCTCGAGCCC GCGATGTTCG CCGACCGCAA CTTTGCCACC GGCCTCGTCT TCATCTTCGT GGTGGGGATC ATCCTCCTGG CGAGCCTCGC GCTCCTGCCG CCGATGCTGT CGCACATCTT CGGCTATCCG GTCATCACCA CCGGCCTCGT GATGGCGCCG CGCGGGGTGG GGACGATGAT CTCGATGCTG ATCGCCGGGC GGATGCTGCG CTTCGTCGAT GCGCGGCTGA TGGTGACGGC GGGTCTCTCG CTCACCGCCC TGTCGCTGCA CATGATGACG GGCTTCAGCC CGCAGATGGA CAGCACGCCC ATCGTGCTCT CGGGCGTCGT GCAGGGTCTG GGTCTGGGCC TCGTCTTCGT GCCGCTCTCG ACCGTGGCCT TCGCCACCAT CGCGCCGCGC TTCCGCGCCG ATGCCACGAG CCTCTTCAGC CTTGTGCGCA ACATCGGCTC GTCGGTGGGC ATCTCGATGG TGACGGTGAT GCTCACCCAC AACAGCCAGA TCAACCATGC CGAGCTCGGG GCAAATGTGA CGCCCTACAA TCCGCAGCTC TGGCAGCTCT CGCCCGACGC CGCGCAGGGG GGCCTGCAGT CGCTCGCGGT GATCGACCGG CTGGTGACGC AGCAGGCCAC GATGATCGGC TATATCGACG ATTTCCGCCT GATGATGCTC ATCACTCTGG CGGCGCTTCC GCTGGCGCTC CTGCTGCGCA AGCCCAGGGC GGGCGGCGCG CCGGTCACCG TTCACGCGGA CTGA
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Protein sequence | MTAAQKQPVE HRGLITLVIM LATIMQVLDT TIANVALPSM TGDLDASADT INWVLTSYIV AAAIMTPVTG WLADRIGKRE LFLVSIVGFT LASMACGLSW SLPSMVGFRL LQGVFGAAIV PLSQTFLLDI NPREKAGQAM ALWGAGIMVG PIIGPTLGGW LTESWDWRWV FFINLPVGIV AFLGCAAWLP RAERVVRRFD FFGFAMLAIA LGSLQLMLDR GAEVEWFAAL EIWIYLFLML TGFWVFVIHI LGAEKPFLEP AMFADRNFAT GLVFIFVVGI ILLASLALLP PMLSHIFGYP VITTGLVMAP RGVGTMISML IAGRMLRFVD ARLMVTAGLS LTALSLHMMT GFSPQMDSTP IVLSGVVQGL GLGLVFVPLS TVAFATIAPR FRADATSLFS LVRNIGSSVG ISMVTVMLTH NSQINHAELG ANVTPYNPQL WQLSPDAAQG GLQSLAVIDR LVTQQATMIG YIDDFRLMML ITLAALPLAL LLRKPRAGGA PVTVHAD
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