Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0883 |
Symbol | |
ID | 4897849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 904786 |
End bp | 905754 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640111468 |
Product | inner-membrane translocator |
Protein accession | YP_001042766 |
Protein GI | 126461652 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.685586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGATC TGCCGACCCT CCTTCAGATC CTCGATTCCA CCATCCGCCT CGGCACGCCG CTGCTTCTCG CCTGCCTCGC CGGGCTCTTC TCCGAGCGGG CGGGCATCTT CGACATCGGG CTCGAGGGCA AGATGCTGGC GGCGGCCTTC CTGTCCGCCG CCGTGGCCTT CGTCACGGGT TCGGTCTGGC TCGGGCTCGT CGCGGGGATC GTGGCCTCGC TGCTGATGTC GGCGATCCAC GGGCTCGCCT CGATCACCTT CCGCGGCAAT CAGCTGATCT CCGGCGTGGC GATCAACTTC CTCGCCTCCG GCCTGACGGT TCTGCTCGGC CAATACTGGT TCGCGCTCGG CGGCCGCACG CCCTCGCTCG AAGGGGCCGC GCGCTTCGCG CCGATCACGC TGCCCTTCGC GGAAGAGCTG CGCGGCGTGC CGGTGCTGGG GCCGATCTAC CGCGAGCTGA TCTCGGGCCA TACGGCGCTG GTCTACATTG CGCTGCTCGC GGTGCCCGCG TCCTGGTGGC TGCTCTACCG CACGCGCTTC GGCCTGAGGC TGCGCGCGGT GGGCGAGAAC CCGGCCGCCG TCGACACGGC GGGCGTGTCC GTCGTGGGCA TCCGCTATGC GGCGGTGGCG ATCTGCGGGC TTCTCACCGG GCTCGCCGGC GCCTATCTGG CCTGCAGCCT TTCGGCAGGC TTCGTGAAGG AGATGACCGC GGGGCGCGGC TATATCGCGC TCGCGGCCCT CATCTTCGCC AAGTGGCGTC CCTGGCAGGC GCTGGGGGCC ACCATGCTCT TCGGCCTGCT CGAGGCGGTC GCCAACCGCT ATCAGTCGCT CGATCTCTGG GGTCTGCCGC TTCCGGTGCA GTTCATGCAG GCGCTTCCCT ACATTCTCAC GGTCATCATC CTCGCCGGGT TCGTCGGCAA GGCGATCCCG CCGCGCGCGG GCGGCCAACC CTATGTGAAG GAACGCTGA
|
Protein sequence | MMDLPTLLQI LDSTIRLGTP LLLACLAGLF SERAGIFDIG LEGKMLAAAF LSAAVAFVTG SVWLGLVAGI VASLLMSAIH GLASITFRGN QLISGVAINF LASGLTVLLG QYWFALGGRT PSLEGAARFA PITLPFAEEL RGVPVLGPIY RELISGHTAL VYIALLAVPA SWWLLYRTRF GLRLRAVGEN PAAVDTAGVS VVGIRYAAVA ICGLLTGLAG AYLACSLSAG FVKEMTAGRG YIALAALIFA KWRPWQALGA TMLFGLLEAV ANRYQSLDLW GLPLPVQFMQ ALPYILTVII LAGFVGKAIP PRAGGQPYVK ER
|
| |