Gene Rsph17029_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0883 
Symbol 
ID4897849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp904786 
End bp905754 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID640111468 
Productinner-membrane translocator 
Protein accessionYP_001042766 
Protein GI126461652 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.685586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATC TGCCGACCCT CCTTCAGATC CTCGATTCCA CCATCCGCCT CGGCACGCCG 
CTGCTTCTCG CCTGCCTCGC CGGGCTCTTC TCCGAGCGGG CGGGCATCTT CGACATCGGG
CTCGAGGGCA AGATGCTGGC GGCGGCCTTC CTGTCCGCCG CCGTGGCCTT CGTCACGGGT
TCGGTCTGGC TCGGGCTCGT CGCGGGGATC GTGGCCTCGC TGCTGATGTC GGCGATCCAC
GGGCTCGCCT CGATCACCTT CCGCGGCAAT CAGCTGATCT CCGGCGTGGC GATCAACTTC
CTCGCCTCCG GCCTGACGGT TCTGCTCGGC CAATACTGGT TCGCGCTCGG CGGCCGCACG
CCCTCGCTCG AAGGGGCCGC GCGCTTCGCG CCGATCACGC TGCCCTTCGC GGAAGAGCTG
CGCGGCGTGC CGGTGCTGGG GCCGATCTAC CGCGAGCTGA TCTCGGGCCA TACGGCGCTG
GTCTACATTG CGCTGCTCGC GGTGCCCGCG TCCTGGTGGC TGCTCTACCG CACGCGCTTC
GGCCTGAGGC TGCGCGCGGT GGGCGAGAAC CCGGCCGCCG TCGACACGGC GGGCGTGTCC
GTCGTGGGCA TCCGCTATGC GGCGGTGGCG ATCTGCGGGC TTCTCACCGG GCTCGCCGGC
GCCTATCTGG CCTGCAGCCT TTCGGCAGGC TTCGTGAAGG AGATGACCGC GGGGCGCGGC
TATATCGCGC TCGCGGCCCT CATCTTCGCC AAGTGGCGTC CCTGGCAGGC GCTGGGGGCC
ACCATGCTCT TCGGCCTGCT CGAGGCGGTC GCCAACCGCT ATCAGTCGCT CGATCTCTGG
GGTCTGCCGC TTCCGGTGCA GTTCATGCAG GCGCTTCCCT ACATTCTCAC GGTCATCATC
CTCGCCGGGT TCGTCGGCAA GGCGATCCCG CCGCGCGCGG GCGGCCAACC CTATGTGAAG
GAACGCTGA
 
Protein sequence
MMDLPTLLQI LDSTIRLGTP LLLACLAGLF SERAGIFDIG LEGKMLAAAF LSAAVAFVTG 
SVWLGLVAGI VASLLMSAIH GLASITFRGN QLISGVAINF LASGLTVLLG QYWFALGGRT
PSLEGAARFA PITLPFAEEL RGVPVLGPIY RELISGHTAL VYIALLAVPA SWWLLYRTRF
GLRLRAVGEN PAAVDTAGVS VVGIRYAAVA ICGLLTGLAG AYLACSLSAG FVKEMTAGRG
YIALAALIFA KWRPWQALGA TMLFGLLEAV ANRYQSLDLW GLPLPVQFMQ ALPYILTVII
LAGFVGKAIP PRAGGQPYVK ER