Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0859 |
Symbol | |
ID | 4897708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 878031 |
End bp | 879251 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640111444 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_001042742 |
Protein GI | 126461628 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.194721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCGC TCCCCCCACC CCGCTTCCTC GACCGTCGCT CGCCGCCCCA CATCCTCACG CTGGTGATGC TGACGGGGCT GGCGGCCCTG GCCATGAACA TCTTCCTGCC GTCTCTGCCG GGGATGTCCG CCTGGTTCGA CGCGCCCTAC CAGTTGCTGC AACTGTCGGT CGCGCTCTAT CTCGGGCTCA GCGCCCTCCT TCAGGTGGCG GTGGGGCCGA TCTCGGACCG GTTCGGCCGG CGGAACGTGA TCCTGTGGTC GCTGGGCCTG TTCCTCGCGG CGACGGTGGG CACGCTGCTG GCACCCACGG CCGAGGTCTT CCTCGTCTTC CGCATGGCGC AGGCGGTGAT CGCGGCCGGC ATGGTGCTGA GCCGCGCCAT CGTGCGGGAC ATGGTGCCCG ACGAGCAGGC AGCCTCGATG ATCGGCTATG TCACCATGGG CATGTCGCTC GTGCCCATGA TCGGGCCGGT GATCGGCGGG ATGCTCGACG AGGCCTTCGG CTGGCAGGCG AACTTCACCC TCCTTCTGGT GCTGGGGCTC CTCGTCACGG CCTTGGTCTG GGCCGATCTC GGCGAGACCT CCGAGATCCG CCCCGTAAGC TTCGGCGCGC AGCTGCGCCA GTATCCGGCG CTTCTGGGCT CGCAGCGCTT CTGGGGCTAT GTGCTCTGCG CGGCCTTCGC CTCGGGCTGC TTCTTCGCCT ATCTCGGCGG CGCGCCCTTC GTGGGCACCG AGATCTTCCA CCTCTCCTCG TCGCAGGTCG GGCTCTATTT CTCGGCCCCC GCCATCGGCT ATGCGCTGGG GAACTTCCTG TCGGGGCGCT TCTCGATCCG CATGGGCATG AACCGGATGG TGCTCTGGGG CACGGTCGCG ACCACGCTGG GCCTTGCGAT CCTGATGGCG GGCACGCTCG CGGGGCTGCA CCATCCGCTC TTCTTCTTCG GCATGATGAC GGCCGTGGGG CTCGGCAACG GCATGGTGCT GCCCAATGCC AATGCGGGGA TGCTCTCGAT CCATCCGCAG CTCGCGGGCA CCGCCTCGGG CCTCGGCGGG GCGATCATGA TCGGCGGCGG CGCAGCCCTC GCGGCCCTCG CCGGGGTGGT GCTGACAGTG GAGGGCGGAG AGATGCCGCT CATCCTCATC ATGCTCTTCT CGGGCGCCGC CTCGGTCGTC TCGATCCTCT GGGTGATGCG CCGCGCGCGG GCGCTCGGCC TCGCCCCCTG A
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Protein sequence | MIALPPPRFL DRRSPPHILT LVMLTGLAAL AMNIFLPSLP GMSAWFDAPY QLLQLSVALY LGLSALLQVA VGPISDRFGR RNVILWSLGL FLAATVGTLL APTAEVFLVF RMAQAVIAAG MVLSRAIVRD MVPDEQAASM IGYVTMGMSL VPMIGPVIGG MLDEAFGWQA NFTLLLVLGL LVTALVWADL GETSEIRPVS FGAQLRQYPA LLGSQRFWGY VLCAAFASGC FFAYLGGAPF VGTEIFHLSS SQVGLYFSAP AIGYALGNFL SGRFSIRMGM NRMVLWGTVA TTLGLAILMA GTLAGLHHPL FFFGMMTAVG LGNGMVLPNA NAGMLSIHPQ LAGTASGLGG AIMIGGGAAL AALAGVVLTV EGGEMPLILI MLFSGAASVV SILWVMRRAR ALGLAP
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