| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0839 |
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| Symbol | |
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| ID | 4896849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 855205 |
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| End bp | 855945 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640111424 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001042722 |
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| Protein GI | 126461608 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCGA TCCGCGACCA CAATCCCTCG GGCCGCACGC CCTATGTGAC CTATGCGCTG
ATCGCGGCGA ATGTCCTGAT CTTTCTCGCG ATGCATTACG GCTCGGCCTC GCCTCTGGCG
CTGGAGGCCG CCTTCTTCGA CTGGGGCCTC GTGCCGGCGG AACTCATGCA GGGGCAGGGC
TACGAGGGGC TTCTCACCTC GATGTTCCTC CATGGCGGCT GGGCGCATCT GCTGGGCAAC
ATGCTCTTTC TCTACATCTA CGGCGACAAT CTCGAGGATG TGCTGGGGCA CGGCGGCTTC
TCGCTCTTCT ACCTCGCCGC GGGGCTTGCG GCCGCAGGCG CGCAGGTGCT GGCCGATCCC
TTCTCGTGGC TCCCCATGGT GGGCGCCTCG GGCGCCATCG CCGGAGTGAT GGGGGGCTAT
CTTCTCCTCT TTCCGCGGGC GAAGGTCGAT GTGCTCATCA TCATCGTCAT CTTCTTCCGC
ATCATTCCCG TCCCGGCCTT CCTGCTGCTC GGGCTCTGGT TCCTGTTCCA GATCGTCTCG
GGCGTGGCGG TGCCGACCGA TCAGGGCGGC GTGGCCTACT GGGCCCATGC GGGCGGCTTC
GGCGCGGGCA TCCTGCTCAC GCTGCCCGCC TTCATCGCCC GCGGCGGGCC GGCCTTCTGG
CAGCGCACCC ACGGGCTGCC CCCCCATCCC GAGGCGGCGC TGCCGCGCTC GAACGTCCCT
CTTGTGCGGA GAAAGCGATG A
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| Protein sequence | MFPIRDHNPS GRTPYVTYAL IAANVLIFLA MHYGSASPLA LEAAFFDWGL VPAELMQGQG
YEGLLTSMFL HGGWAHLLGN MLFLYIYGDN LEDVLGHGGF SLFYLAAGLA AAGAQVLADP
FSWLPMVGAS GAIAGVMGGY LLLFPRAKVD VLIIIVIFFR IIPVPAFLLL GLWFLFQIVS
GVAVPTDQGG VAYWAHAGGF GAGILLTLPA FIARGGPAFW QRTHGLPPHP EAALPRSNVP
LVRRKR
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